Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-7-dv9A0A075B639 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-7-dv9A0A075B639 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-7-dv9A0A075B639 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-7-dv9A0A075B639 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-7-dv9A0A075B639 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-7-dv9A0A075B639 Gm11927-201ENSMUST00000118472 759 ntBASIC15.66■□□□□ 0.1
Trav6-7-dv9A0A075B639 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.66■□□□□ 0.1
Trav6-7-dv9A0A075B639 Gm2559-201ENSMUST00000201323 363 ntBASIC15.66■□□□□ 0.1
Trav6-7-dv9A0A075B639 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trav6-7-dv9A0A075B639 Gm4968-201ENSMUST00000071458 858 ntBASIC15.66■□□□□ 0.1
Trav6-7-dv9A0A075B639 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trav6-7-dv9A0A075B639 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-7-dv9A0A075B639 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-7-dv9A0A075B639 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-7-dv9A0A075B639 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-7-dv9A0A075B639 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-7-dv9A0A075B639 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-7-dv9A0A075B639 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-7-dv9A0A075B639 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-7-dv9A0A075B639 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-7-dv9A0A075B639 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-7-dv9A0A075B639 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-7-dv9A0A075B639 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav6-7-dv9A0A075B639 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-7-dv9A0A075B639 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav6-7-dv9A0A075B639 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-7-dv9A0A075B639 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav6-7-dv9A0A075B639 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav6-7-dv9A0A075B639 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-7-dv9A0A075B639 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.65■□□□□ 0.1
Trav6-7-dv9A0A075B639 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-7-dv9A0A075B639 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.65■□□□□ 0.1
Trav6-7-dv9A0A075B639 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.65■□□□□ 0.1
Trav6-7-dv9A0A075B639 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.65■□□□□ 0.1
Trav6-7-dv9A0A075B639 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.65■□□□□ 0.1
Trav6-7-dv9A0A075B639 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-7-dv9A0A075B639 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-7-dv9A0A075B639 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-7-dv9A0A075B639 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav6-7-dv9A0A075B639 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-7-dv9A0A075B639 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-7-dv9A0A075B639 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav6-7-dv9A0A075B639 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-7-dv9A0A075B639 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-7-dv9A0A075B639 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-7-dv9A0A075B639 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-7-dv9A0A075B639 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-7-dv9A0A075B639 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav6-7-dv9A0A075B639 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.64■□□□□ 0.09
Trav6-7-dv9A0A075B639 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-7-dv9A0A075B639 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-7-dv9A0A075B639 Gm10602-201ENSMUST00000098239 609 ntBASIC15.64■□□□□ 0.09
Trav6-7-dv9A0A075B639 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trav6-7-dv9A0A075B639 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-7-dv9A0A075B639 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-7-dv9A0A075B639 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-7-dv9A0A075B639 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-7-dv9A0A075B639 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-7-dv9A0A075B639 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-7-dv9A0A075B639 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-7-dv9A0A075B639 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-7-dv9A0A075B639 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-7-dv9A0A075B639 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav6-7-dv9A0A075B639 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-7-dv9A0A075B639 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-7-dv9A0A075B639 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-7-dv9A0A075B639 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trav6-7-dv9A0A075B639 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-7-dv9A0A075B639 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-7-dv9A0A075B639 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav6-7-dv9A0A075B639 Mir2861-201ENSMUST00000175539 82 ntBASIC15.63■□□□□ 0.09
Trav6-7-dv9A0A075B639 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-7-dv9A0A075B639 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-7-dv9A0A075B639 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-7-dv9A0A075B639 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-7-dv9A0A075B639 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-7-dv9A0A075B639 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-7-dv9A0A075B639 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-7-dv9A0A075B639 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-7-dv9A0A075B639 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-7-dv9A0A075B639 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-7-dv9A0A075B639 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-7-dv9A0A075B639 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-7-dv9A0A075B639 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-7-dv9A0A075B639 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-7-dv9A0A075B639 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-7-dv9A0A075B639 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav6-7-dv9A0A075B639 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-7-dv9A0A075B639 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-7-dv9A0A075B639 Mir6349-201ENSMUST00000184059 97 ntBASIC15.62■□□□□ 0.09
Trav6-7-dv9A0A075B639 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-7-dv9A0A075B639 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-7-dv9A0A075B639 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-7-dv9A0A075B639 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-7-dv9A0A075B639 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-7-dv9A0A075B639 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.62■□□□□ 0.09
Trav6-7-dv9A0A075B639 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.62■□□□□ 0.09
Trav6-7-dv9A0A075B639 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-7-dv9A0A075B639 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms