Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6n-5A0A075B621 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6n-5A0A075B621 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav6n-5A0A075B621 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6n-5A0A075B621 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav6n-5A0A075B621 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trav6n-5A0A075B621 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6n-5A0A075B621 Gm12922-201ENSMUST00000120626 809 ntBASIC13.69□□□□□ -0.22
Trav6n-5A0A075B621 Gm26971-201ENSMUST00000182423 1072 ntBASIC13.69□□□□□ -0.22
Trav6n-5A0A075B621 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6n-5A0A075B621 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav6n-5A0A075B621 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav6n-5A0A075B621 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6n-5A0A075B621 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav6n-5A0A075B621 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Trav6n-5A0A075B621 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6n-5A0A075B621 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6n-5A0A075B621 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6n-5A0A075B621 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6n-5A0A075B621 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav6n-5A0A075B621 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6n-5A0A075B621 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-5A0A075B621 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Trav6n-5A0A075B621 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-5A0A075B621 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav6n-5A0A075B621 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-5A0A075B621 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-5A0A075B621 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav6n-5A0A075B621 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-5A0A075B621 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav6n-5A0A075B621 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-5A0A075B621 Smad6-203ENSMUST00000179458 273 ntBASIC13.68□□□□□ -0.22
Trav6n-5A0A075B621 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-5A0A075B621 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-5A0A075B621 Gm5812-201ENSMUST00000061073 957 ntBASIC13.68□□□□□ -0.22
Trav6n-5A0A075B621 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.68□□□□□ -0.22
Trav6n-5A0A075B621 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-5A0A075B621 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-5A0A075B621 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-5A0A075B621 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-5A0A075B621 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-5A0A075B621 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-5A0A075B621 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Trav6n-5A0A075B621 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6n-5A0A075B621 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 Gm22325-201ENSMUST00000158904 308 ntBASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6n-5A0A075B621 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6n-5A0A075B621 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav6n-5A0A075B621 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms