Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Mir1188-201ENSMUST00000116756 120 ntBASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Gm13451-201ENSMUST00000117649 592 ntBASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Gm25824-201ENSMUST00000157092 121 ntBASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Gm26373-201ENSMUST00000157833 103 ntBASIC4.66□□□□□ -1.66
Lima1Q9ERG0 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Gm17044-201ENSMUST00000168549 828 ntBASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Gm9457-201ENSMUST00000180176 372 ntBASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Gm37243-201ENSMUST00000193407 595 ntBASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Gm43116-201ENSMUST00000199789 195 ntBASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC4.66□□□□□ -1.66
Lima1Q9ERG0 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Gm6065-201ENSMUST00000081336 492 ntBASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lima1Q9ERG0 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Lima1Q9ERG0 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC4.65□□□□□ -1.66
Lima1Q9ERG0 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
Lima1Q9ERG0 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Lima1Q9ERG0 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Lima1Q9ERG0 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Lima1Q9ERG0 n-R5s16-201ENSMUST00000104555 119 ntBASIC4.65□□□□□ -1.67
Lima1Q9ERG0 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Lima1Q9ERG0 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Lima1Q9ERG0 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Lima1Q9ERG0 Mir3110-201ENSMUST00000175053 80 ntBASIC4.65□□□□□ -1.67
Lima1Q9ERG0 Gm27849-201ENSMUST00000183673 125 ntBASIC4.65□□□□□ -1.67
Lima1Q9ERG0 Gm19206-201ENSMUST00000186401 827 ntBASIC4.65□□□□□ -1.67
Lima1Q9ERG0 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Lima1Q9ERG0 Gm29454-201ENSMUST00000190805 393 ntBASIC4.65□□□□□ -1.67
Lima1Q9ERG0 Gm44456-201ENSMUST00000196554 89 ntBASIC4.65□□□□□ -1.67
Lima1Q9ERG0 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Lima1Q9ERG0 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Lima1Q9ERG0 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC4.65□□□□□ -1.67
Lima1Q9ERG0 Gm7825-201ENSMUST00000204046 416 ntBASIC4.65□□□□□ -1.67
Lima1Q9ERG0 Gm18306-201ENSMUST00000207338 569 ntBASIC4.65□□□□□ -1.67
Lima1Q9ERG0 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC4.65□□□□□ -1.67
Lima1Q9ERG0 AC211878.5-201ENSMUST00000221697 409 ntBASIC4.65□□□□□ -1.67
Lima1Q9ERG0 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC4.65□□□□□ -1.67
Lima1Q9ERG0 AC154527.3-201ENSMUST00000225519 989 ntBASIC4.65□□□□□ -1.67
Lima1Q9ERG0 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.65□□□□□ -1.67
Lima1Q9ERG0 Gm5215-201ENSMUST00000054380 405 ntBASIC4.65□□□□□ -1.67
Lima1Q9ERG0 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Lima1Q9ERG0 Mir188-201ENSMUST00000083464 68 ntBASIC4.65□□□□□ -1.67
Lima1Q9ERG0 Mir337-201ENSMUST00000083592 97 ntBASIC4.65□□□□□ -1.67
Lima1Q9ERG0 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Lima1Q9ERG0 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.65□□□□□ -1.67
Lima1Q9ERG0 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.65□□□□□ -1.67
Lima1Q9ERG0 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Lima1Q9ERG0 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Lima1Q9ERG0 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Lima1Q9ERG0 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.64□□□□□ -1.67
Lima1Q9ERG0 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Lima1Q9ERG0 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.64□□□□□ -1.67
Lima1Q9ERG0 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Lima1Q9ERG0 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
Lima1Q9ERG0 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.64□□□□□ -1.67
Lima1Q9ERG0 Gm37470-201ENSMUST00000193378 2798 ntBASIC4.64□□□□□ -1.67
Lima1Q9ERG0 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
Lima1Q9ERG0 Gm14995-201ENSMUST00000117135 391 ntBASIC4.64□□□□□ -1.67
Lima1Q9ERG0 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.64□□□□□ -1.67
Lima1Q9ERG0 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms