Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Gm21617-201ENSMUST00000188297 691 ntBASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Gm38011-201ENSMUST00000193312 279 ntBASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Gm37445-201ENSMUST00000195318 242 ntBASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Gm37973-201ENSMUST00000195767 1289 ntBASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Gm9238-201ENSMUST00000196181 329 ntBASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Gm43093-201ENSMUST00000202439 1213 ntBASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Gm43919-201ENSMUST00000204303 364 ntBASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Gm43922-201ENSMUST00000205071 328 ntBASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Smc1aQ9CU62 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.57□□□□□ -1.52
Smc1aQ9CU62 AC134439.1-201ENSMUST00000220923 600 ntBASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Gm23972-201ENSMUST00000083322 165 ntBASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Smc1aQ9CU62 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Gm14711-201ENSMUST00000117056 217 ntBASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Gm11346-201ENSMUST00000118346 704 ntBASIC5.56□□□□□ -1.52
Smc1aQ9CU62 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.56□□□□□ -1.52
Smc1aQ9CU62 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Gm25865-201ENSMUST00000158247 104 ntBASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Gm20203-201ENSMUST00000192352 332 ntBASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Gm36998-201ENSMUST00000193205 704 ntBASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Gm18843-201ENSMUST00000194982 719 ntBASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Gm43524-201ENSMUST00000197278 298 ntBASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Gm18330-201ENSMUST00000199246 547 ntBASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Gm43036-201ENSMUST00000200594 373 ntBASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Gm44261-201ENSMUST00000203337 209 ntBASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Gm4290-201ENSMUST00000206897 814 ntBASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC5.56□□□□□ -1.52
Smc1aQ9CU62 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC5.56□□□□□ -1.52
Smc1aQ9CU62 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Gm25147-201ENSMUST00000083030 105 ntBASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.56□□□□□ -1.52
Smc1aQ9CU62 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.55□□□□□ -1.52
Smc1aQ9CU62 AC165106.3-201ENSMUST00000228191 3843 ntBASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm15394-201ENSMUST00000119656 1308 ntBASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm13195-201ENSMUST00000117229 261 ntBASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm12401-201ENSMUST00000118435 228 ntBASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm12849-201ENSMUST00000120013 739 ntBASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm8988-201ENSMUST00000155015 1240 ntBASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm23534-201ENSMUST00000157539 97 ntBASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm22804-201ENSMUST00000158052 101 ntBASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm4134-201ENSMUST00000173244 563 ntBASIC5.55□□□□□ -1.52
Smc1aQ9CU62 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm2607-201ENSMUST00000212389 627 ntBASIC5.55□□□□□ -1.52
Smc1aQ9CU62 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 n-R5s27-201ENSMUST00000093699 119 ntBASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Gm37814-201ENSMUST00000195820 3644 ntBASIC5.55□□□□□ -1.52
Smc1aQ9CU62 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms