Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Use1Q9CQ56 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC4.58□□□□□ -1.68
Use1Q9CQ56 Gm3086-202ENSMUST00000221248 310 ntBASIC4.58□□□□□ -1.68
Use1Q9CQ56 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.58□□□□□ -1.68
Use1Q9CQ56 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Use1Q9CQ56 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
Use1Q9CQ56 Mir7-2-201ENSMUST00000083675 97 ntBASIC4.58□□□□□ -1.68
Use1Q9CQ56 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Use1Q9CQ56 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Use1Q9CQ56 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Use1Q9CQ56 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Use1Q9CQ56 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.58□□□□□ -1.68
Use1Q9CQ56 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Use1Q9CQ56 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Use1Q9CQ56 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Use1Q9CQ56 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Use1Q9CQ56 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Gm10727-201ENSMUST00000197107 1602 ntBASIC4.57□□□□□ -1.68
Use1Q9CQ56 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Gm23274-201ENSMUST00000104056 130 ntBASIC4.57□□□□□ -1.68
Use1Q9CQ56 Gm25418-201ENSMUST00000104214 129 ntBASIC4.57□□□□□ -1.68
Use1Q9CQ56 Gm25419-201ENSMUST00000104215 191 ntBASIC4.57□□□□□ -1.68
Use1Q9CQ56 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC4.57□□□□□ -1.68
Use1Q9CQ56 Gm11325-201ENSMUST00000119967 469 ntBASIC4.57□□□□□ -1.68
Use1Q9CQ56 Gm11507-201ENSMUST00000156462 412 ntBASIC4.57□□□□□ -1.68
Use1Q9CQ56 Gm22383-201ENSMUST00000158188 327 ntBASIC4.57□□□□□ -1.68
Use1Q9CQ56 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Use1Q9CQ56 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Gm4831-201ENSMUST00000174626 594 ntBASIC4.57□□□□□ -1.68
Use1Q9CQ56 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Use1Q9CQ56 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Gm29610-201ENSMUST00000187749 453 ntBASIC4.57□□□□□ -1.68
Use1Q9CQ56 Mrgpra14-201ENSMUST00000189782 913 ntBASIC4.57□□□□□ -1.68
Use1Q9CQ56 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Gm43925-201ENSMUST00000203498 206 ntBASIC4.57□□□□□ -1.68
Use1Q9CQ56 Gm44162-201ENSMUST00000203543 544 ntBASIC4.57□□□□□ -1.68
Use1Q9CQ56 Gm44817-201ENSMUST00000205416 453 ntBASIC4.57□□□□□ -1.68
Use1Q9CQ56 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Gm45171-201ENSMUST00000206360 736 ntBASIC4.57□□□□□ -1.68
Use1Q9CQ56 Gm44648-201ENSMUST00000208267 329 ntBASIC4.57□□□□□ -1.68
Use1Q9CQ56 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Use1Q9CQ56 AC154527.3-201ENSMUST00000225519 989 ntBASIC4.57□□□□□ -1.68
Use1Q9CQ56 CT030662.2-201ENSMUST00000226942 805 ntBASIC4.57□□□□□ -1.68
Use1Q9CQ56 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC4.57□□□□□ -1.68
Use1Q9CQ56 AC121912.1-201ENSMUST00000227525 1201 ntBASIC4.57□□□□□ -1.68
Use1Q9CQ56 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.57□□□□□ -1.68
Use1Q9CQ56 Gm23459-201ENSMUST00000083259 131 ntBASIC4.57□□□□□ -1.68
Use1Q9CQ56 Gm25682-201ENSMUST00000083942 164 ntBASIC4.57□□□□□ -1.68
Use1Q9CQ56 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.57□□□□□ -1.68
Use1Q9CQ56 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Use1Q9CQ56 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Use1Q9CQ56 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Use1Q9CQ56 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC4.56□□□□□ -1.68
Use1Q9CQ56 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Use1Q9CQ56 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Use1Q9CQ56 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC4.56□□□□□ -1.68
Use1Q9CQ56 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Use1Q9CQ56 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.56□□□□□ -1.68
Use1Q9CQ56 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Use1Q9CQ56 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Use1Q9CQ56 Gm25758-201ENSMUST00000103987 129 ntBASIC4.56□□□□□ -1.68
Use1Q9CQ56 Gm23910-201ENSMUST00000104597 132 ntBASIC4.56□□□□□ -1.68
Use1Q9CQ56 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Use1Q9CQ56 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Use1Q9CQ56 Gm14788-201ENSMUST00000119457 375 ntBASIC4.56□□□□□ -1.68
Use1Q9CQ56 Gm14601-201ENSMUST00000120892 236 ntBASIC4.56□□□□□ -1.68
Use1Q9CQ56 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.56□□□□□ -1.68
Use1Q9CQ56 Gm2182-201ENSMUST00000145243 663 ntBASIC4.56□□□□□ -1.68
Use1Q9CQ56 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC4.56□□□□□ -1.68
Use1Q9CQ56 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Use1Q9CQ56 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Use1Q9CQ56 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC4.56□□□□□ -1.68
Use1Q9CQ56 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Use1Q9CQ56 Gm28389-201ENSMUST00000190090 697 ntBASIC4.56□□□□□ -1.68
Use1Q9CQ56 Gm20770-201ENSMUST00000193474 694 ntBASIC4.56□□□□□ -1.68
Use1Q9CQ56 Gm37710-201ENSMUST00000193501 1274 ntBASIC4.56□□□□□ -1.68
Use1Q9CQ56 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms