Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm23014-201ENSMUST00000104144 130 ntBASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Gm16394-201ENSMUST00000117289 675 ntBASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Gm14878-201ENSMUST00000118167 293 ntBASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Gm7363-201ENSMUST00000119883 399 ntBASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Gm15828-201ENSMUST00000119911 522 ntBASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Gm9208-201ENSMUST00000120468 948 ntBASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Gm9294-201ENSMUST00000165198 789 ntBASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Gm6632-201ENSMUST00000168425 954 ntBASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Gm27568-201ENSMUST00000184220 99 ntBASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Gm29664-201ENSMUST00000191125 463 ntBASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Gm37173-201ENSMUST00000194498 1017 ntBASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Gm5284-201ENSMUST00000199053 903 ntBASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 AC155922.1-201ENSMUST00000220100 373 ntBASIC4.99□□□□□ -1.61
Cstf1Q99LC2 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cstf1Q99LC2 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Gm44739-201ENSMUST00000205294 1426 ntBASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Gm14933-201ENSMUST00000118840 481 ntBASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Gm26362-201ENSMUST00000158865 315 ntBASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Gm18128-201ENSMUST00000172625 511 ntBASIC4.98□□□□□ -1.61
Cstf1Q99LC2 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Gm7822-201ENSMUST00000222433 581 ntBASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 AC154738.4-201ENSMUST00000228310 414 ntBASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Snord59a-201ENSMUST00000082844 74 ntBASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Gm25260-201ENSMUST00000083053 134 ntBASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Gm29488-201ENSMUST00000191427 2402 ntBASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Cstf1Q99LC2 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Cstf1Q99LC2 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC4.97□□□□□ -1.61
Cstf1Q99LC2 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Cstf1Q99LC2 Gm42671-201ENSMUST00000198013 1604 ntBASIC4.97□□□□□ -1.61
Cstf1Q99LC2 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Cstf1Q99LC2 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Cstf1Q99LC2 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Cstf1Q99LC2 Gm37677-201ENSMUST00000194520 7634 ntBASIC4.97□□□□□ -1.61
Cstf1Q99LC2 AC170999.1-201ENSMUST00000226359 1585 ntBASIC4.97□□□□□ -1.61
Cstf1Q99LC2 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Cstf1Q99LC2 Snord65-201ENSMUST00000104269 72 ntBASIC4.97□□□□□ -1.61
Cstf1Q99LC2 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Cstf1Q99LC2 Gm9308-201ENSMUST00000119073 448 ntBASIC4.97□□□□□ -1.61
Cstf1Q99LC2 Gm14908-201ENSMUST00000120930 1286 ntBASIC4.97□□□□□ -1.61
Cstf1Q99LC2 Gm12007-201ENSMUST00000120978 597 ntBASIC4.97□□□□□ -1.61
Cstf1Q99LC2 Gm6027-201ENSMUST00000121467 756 ntBASIC4.97□□□□□ -1.61
Cstf1Q99LC2 Gm15075-201ENSMUST00000122187 477 ntBASIC4.97□□□□□ -1.61
Cstf1Q99LC2 Zakit-201ENSMUST00000157677 308 ntBASIC4.97□□□□□ -1.61
Cstf1Q99LC2 Gm23115-201ENSMUST00000158480 108 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms