Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm25672-201ENSMUST00000180111 107 ntBASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Gm27541-201ENSMUST00000184078 122 ntBASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Gm29163-201ENSMUST00000188029 107 ntBASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Gm38149-201ENSMUST00000191943 339 ntBASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Gm7045-201ENSMUST00000221466 605 ntBASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 AC154636.3-201ENSMUST00000221489 1214 ntBASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Gm18247-201ENSMUST00000222937 601 ntBASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 CT009600.1-201ENSMUST00000228771 337 ntBASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Gm23815-201ENSMUST00000083231 107 ntBASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Mir449a-201ENSMUST00000083641 91 ntBASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Gm23520-201ENSMUST00000093736 107 ntBASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Gm43528-201ENSMUST00000199492 1674 ntBASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Pcdha9Q91Y11 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm6913-201ENSMUST00000100019 348 ntBASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm12131-201ENSMUST00000117479 359 ntBASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm14871-201ENSMUST00000119056 194 ntBASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm11481-201ENSMUST00000120069 255 ntBASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm15803-201ENSMUST00000120118 394 ntBASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm25176-201ENSMUST00000122640 125 ntBASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm23059-201ENSMUST00000158978 107 ntBASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm17142-201ENSMUST00000164933 645 ntBASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm8256-201ENSMUST00000169178 453 ntBASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm28604-201ENSMUST00000186629 484 ntBASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm28566-201ENSMUST00000186714 484 ntBASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm28194-201ENSMUST00000187412 484 ntBASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm28886-202ENSMUST00000187889 484 ntBASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pcdha9Q91Y11 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms