Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm13574-201ENSMUST00000120482 394 ntBASIC5.42□□□□□ -1.54
Clrn1Q8K445 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC5.42□□□□□ -1.54
Clrn1Q8K445 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC5.42□□□□□ -1.54
Clrn1Q8K445 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.42□□□□□ -1.54
Clrn1Q8K445 Gm26349-201ENSMUST00000157530 130 ntBASIC5.42□□□□□ -1.54
Clrn1Q8K445 Gm23824-201ENSMUST00000158741 276 ntBASIC5.42□□□□□ -1.54
Clrn1Q8K445 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Clrn1Q8K445 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC5.42□□□□□ -1.54
Clrn1Q8K445 Gm9006-201ENSMUST00000165520 841 ntBASIC5.42□□□□□ -1.54
Clrn1Q8K445 Gm6647-201ENSMUST00000170514 641 ntBASIC5.42□□□□□ -1.54
Clrn1Q8K445 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Clrn1Q8K445 Gm6900-201ENSMUST00000178971 342 ntBASIC5.42□□□□□ -1.54
Clrn1Q8K445 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Clrn1Q8K445 Gm10410-201ENSMUST00000180138 384 ntBASIC5.42□□□□□ -1.54
Clrn1Q8K445 Gm26898-201ENSMUST00000181678 384 ntBASIC5.42□□□□□ -1.54
Clrn1Q8K445 Gm29509-201ENSMUST00000185716 321 ntBASIC5.42□□□□□ -1.54
Clrn1Q8K445 Gm28412-201ENSMUST00000187243 177 ntBASIC5.42□□□□□ -1.54
Clrn1Q8K445 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Clrn1Q8K445 Gm37501-201ENSMUST00000192830 691 ntBASIC5.42□□□□□ -1.54
Clrn1Q8K445 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC5.42□□□□□ -1.54
Clrn1Q8K445 Gm43227-201ENSMUST00000202239 677 ntBASIC5.42□□□□□ -1.54
Clrn1Q8K445 Gm44108-201ENSMUST00000203525 422 ntBASIC5.42□□□□□ -1.54
Clrn1Q8K445 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC5.42□□□□□ -1.54
Clrn1Q8K445 Gm44768-201ENSMUST00000205719 393 ntBASIC5.42□□□□□ -1.54
Clrn1Q8K445 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Clrn1Q8K445 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.42□□□□□ -1.54
Clrn1Q8K445 Gm5176-202ENSMUST00000220267 583 ntBASIC5.42□□□□□ -1.54
Clrn1Q8K445 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Clrn1Q8K445 Gm7042-201ENSMUST00000223027 384 ntBASIC5.42□□□□□ -1.54
Clrn1Q8K445 AL669819.1-201ENSMUST00000225143 330 ntBASIC5.42□□□□□ -1.54
Clrn1Q8K445 AC167013.2-202ENSMUST00000227035 333 ntBASIC5.42□□□□□ -1.54
Clrn1Q8K445 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Clrn1Q8K445 Gm22126-201ENSMUST00000083244 142 ntBASIC5.42□□□□□ -1.54
Clrn1Q8K445 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Clrn1Q8K445 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.42□□□□□ -1.54
Clrn1Q8K445 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Clrn1Q8K445 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Clrn1Q8K445 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC5.42□□□□□ -1.54
Clrn1Q8K445 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Clrn1Q8K445 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.42□□□□□ -1.54
Clrn1Q8K445 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Clrn1Q8K445 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Clrn1Q8K445 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm15443-201ENSMUST00000118947 820 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm6664-201ENSMUST00000119138 468 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm15452-201ENSMUST00000119877 240 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm11410-201ENSMUST00000120053 1143 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm8761-201ENSMUST00000121507 955 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm24724-201ENSMUST00000158230 107 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm26159-201ENSMUST00000158968 104 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 Ear-ps7-201ENSMUST00000161287 442 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm6673-201ENSMUST00000166114 700 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm27210-201ENSMUST00000184263 402 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm27985-201ENSMUST00000185112 378 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm18969-201ENSMUST00000189423 730 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm42818-201ENSMUST00000198869 987 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm43276-201ENSMUST00000199712 364 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm18009-201ENSMUST00000203239 1016 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm19232-201ENSMUST00000211621 652 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 AC139638.1-201ENSMUST00000218027 364 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 AC156559.2-201ENSMUST00000224403 384 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 CT572983.1-201ENSMUST00000226895 514 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 Gm5830-201ENSMUST00000049117 443 ntBASIC5.41□□□□□ -1.54
Clrn1Q8K445 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Clrn1Q8K445 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms