Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm27541-201ENSMUST00000184078 122 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm28683-201ENSMUST00000187134 615 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm28468-201ENSMUST00000188536 615 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm28840-205ENSMUST00000189320 615 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm28835-203ENSMUST00000190062 615 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm36943-201ENSMUST00000194422 282 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm37882-201ENSMUST00000195254 196 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm2623-201ENSMUST00000199229 286 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm42459-201ENSMUST00000199679 742 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm4742-201ENSMUST00000200261 771 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm44162-201ENSMUST00000203543 544 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm17984-201ENSMUST00000205286 859 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 AC122858.1-201ENSMUST00000226212 433 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 CT025525.1-201ENSMUST00000226325 1054 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 AC122858.3-201ENSMUST00000226341 740 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 AC122858.1-202ENSMUST00000228290 986 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm22971-201ENSMUST00000083305 97 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm42671-201ENSMUST00000198013 1604 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm42479-201ENSMUST00000198654 1356 ntBASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm18493-201ENSMUST00000192084 1612 ntBASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm17101-201ENSMUST00000169520 1588 ntBASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm24142-201ENSMUST00000101960 107 ntBASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm22592-201ENSMUST00000104242 131 ntBASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm7206-201ENSMUST00000117730 508 ntBASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm12465-201ENSMUST00000118591 300 ntBASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm12564-201ENSMUST00000119860 321 ntBASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm15227-201ENSMUST00000121844 399 ntBASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm25152-201ENSMUST00000157117 114 ntBASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm24687-201ENSMUST00000157758 241 ntBASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm25865-201ENSMUST00000158247 104 ntBASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm26172-201ENSMUST00000158421 134 ntBASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm10177-201ENSMUST00000160052 444 ntBASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm38181-201ENSMUST00000181357 720 ntBASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm27024-201ENSMUST00000182561 755 ntBASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm9569-201ENSMUST00000187492 787 ntBASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm42539-201ENSMUST00000197009 308 ntBASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm8039-201ENSMUST00000204758 712 ntBASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm46138-201ENSMUST00000215294 426 ntBASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.8□□□□□ -1.64
Ccdc28bQ8CEG5 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc28bQ8CEG5 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 119 ms