Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lrif1Q8CDD9 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lrif1Q8CDD9 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Lrif1Q8CDD9 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Lrif1Q8CDD9 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
Lrif1Q8CDD9 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Lrif1Q8CDD9 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
Lrif1Q8CDD9 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lrif1Q8CDD9 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lrif1Q8CDD9 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
Lrif1Q8CDD9 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Gm44248-201ENSMUST00000203079 1549 ntBASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Gm15766-201ENSMUST00000118025 813 ntBASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Gm12423-201ENSMUST00000118334 135 ntBASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Gm12401-201ENSMUST00000118435 228 ntBASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Gm13007-201ENSMUST00000121866 365 ntBASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 n-R5s174-201ENSMUST00000122638 121 ntBASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Gm7281-201ENSMUST00000160010 543 ntBASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Gm18800-202ENSMUST00000188688 1105 ntBASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Gm17953-201ENSMUST00000192061 667 ntBASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Gm38150-201ENSMUST00000192996 452 ntBASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Gm9442-201ENSMUST00000194242 319 ntBASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Gm43015-201ENSMUST00000199087 565 ntBASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Gm42666-201ENSMUST00000201954 152 ntBASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Gm45731-201ENSMUST00000211988 1203 ntBASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 AC158807.1-201ENSMUST00000217959 187 ntBASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 AC147615.1-201ENSMUST00000218914 441 ntBASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 AV026068-224ENSMUST00000224827 928 ntBASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 AC121912.1-201ENSMUST00000227525 1201 ntBASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Gm24706-201ENSMUST00000082806 137 ntBASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Gm33378-201ENSMUST00000219831 2758 ntBASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Gm4541-201ENSMUST00000208901 1848 ntBASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Lrif1Q8CDD9 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Gm14175-201ENSMUST00000119835 241 ntBASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Gm12288-201ENSMUST00000121054 1282 ntBASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Gm16345-201ENSMUST00000146065 158 ntBASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Gm23116-201ENSMUST00000158481 67 ntBASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Gm19791-201ENSMUST00000180398 859 ntBASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Gm37720-201ENSMUST00000195497 1241 ntBASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Gm2053-201ENSMUST00000195671 631 ntBASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Gm43124-201ENSMUST00000201878 278 ntBASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Gm44523-201ENSMUST00000205616 417 ntBASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Gm44879-201ENSMUST00000207007 503 ntBASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 CT030124.1-201ENSMUST00000217130 235 ntBASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Gm18871-201ENSMUST00000218655 745 ntBASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 CT030242.3-201ENSMUST00000221231 581 ntBASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 AC131178.1-201ENSMUST00000228649 492 ntBASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Gm23514-201ENSMUST00000082827 130 ntBASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Gm24763-201ENSMUST00000083688 190 ntBASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Gm6177-201ENSMUST00000085589 465 ntBASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.78□□□□□ -1.64
Lrif1Q8CDD9 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms