Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm22923-201ENSMUST00000174952 110 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm27541-201ENSMUST00000184078 122 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm2914-201ENSMUST00000186120 328 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm28871-201ENSMUST00000186191 687 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm2053-201ENSMUST00000195671 631 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm42474-201ENSMUST00000201073 505 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm44604-201ENSMUST00000205475 496 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm44919-201ENSMUST00000208587 1073 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm45551-201ENSMUST00000211459 928 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 AC099612.2-201ENSMUST00000226824 721 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 AC102291.1-201ENSMUST00000227164 529 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm23514-201ENSMUST00000082827 130 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Mir27a-201ENSMUST00000083510 87 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm9386-201ENSMUST00000095195 381 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm37551-201ENSMUST00000195556 2861 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm9700-201ENSMUST00000193786 1617 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm43921-201ENSMUST00000204296 1792 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm45819-201ENSMUST00000210940 1751 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Gm42841-201ENSMUST00000199806 1932 ntBASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Vps53Q8CCB4 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Gm12383-201ENSMUST00000120628 760 ntBASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC6.12□□□□□ -1.43
Vps53Q8CCB4 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Gm16060-201ENSMUST00000153140 478 ntBASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Gm16026-202ENSMUST00000159695 772 ntBASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Gm10087-201ENSMUST00000167650 330 ntBASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Gm20519-201ENSMUST00000173684 359 ntBASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Gm37470-201ENSMUST00000193378 2798 ntBASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Gm19104-201ENSMUST00000198392 679 ntBASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Gm18611-201ENSMUST00000200334 1118 ntBASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Gm44673-201ENSMUST00000205692 996 ntBASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Vps53Q8CCB4 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC6.12□□□□□ -1.43
Vps53Q8CCB4 Gm19514-201ENSMUST00000206856 4489 ntBASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Gm14388-201ENSMUST00000118119 477 ntBASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Gm12413-201ENSMUST00000121508 312 ntBASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Gm26350-201ENSMUST00000157531 288 ntBASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Gm28683-201ENSMUST00000187134 615 ntBASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Gm28840-205ENSMUST00000189320 615 ntBASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Gm28835-203ENSMUST00000190062 615 ntBASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Gm28437-201ENSMUST00000190277 783 ntBASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Igkv2-107-201ENSMUST00000196000 313 ntBASIC6.11□□□□□ -1.43
Vps53Q8CCB4 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms