Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 AC122901.2-201ENSMUST00000216926 285 ntBASIC7.26□□□□□ -1.25
Usp40Q8BWR4 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Usp40Q8BWR4 AC156569.1-201ENSMUST00000222020 3841 ntBASIC7.26□□□□□ -1.25
Usp40Q8BWR4 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Usp40Q8BWR4 AC116395.1-201ENSMUST00000225480 1143 ntBASIC7.26□□□□□ -1.25
Usp40Q8BWR4 AC098742.1-201ENSMUST00000227945 373 ntBASIC7.26□□□□□ -1.25
Usp40Q8BWR4 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Usp40Q8BWR4 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Usp40Q8BWR4 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Usp40Q8BWR4 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC7.26□□□□□ -1.25
Usp40Q8BWR4 AC125095.1-201ENSMUST00000228387 2020 ntBASIC7.26□□□□□ -1.25
Usp40Q8BWR4 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC7.26□□□□□ -1.25
Usp40Q8BWR4 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Usp40Q8BWR4 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Usp40Q8BWR4 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Usp40Q8BWR4 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Usp40Q8BWR4 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Usp40Q8BWR4 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Gm37283-201ENSMUST00000193111 1571 ntBASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Gm7657-201ENSMUST00000118851 666 ntBASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Gm11369-201ENSMUST00000120812 318 ntBASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Gm14587-201ENSMUST00000121714 658 ntBASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Gm24393-201ENSMUST00000158135 97 ntBASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Ear-ps9-201ENSMUST00000161963 460 ntBASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Gm8224-201ENSMUST00000166178 497 ntBASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Gm44865-201ENSMUST00000207240 531 ntBASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC7.25□□□□□ -1.25
Usp40Q8BWR4 AC102369.1-201ENSMUST00000218415 373 ntBASIC7.25□□□□□ -1.25
Usp40Q8BWR4 AC153943.1-201ENSMUST00000219312 256 ntBASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC7.25□□□□□ -1.25
Usp40Q8BWR4 AC132384.13-201ENSMUST00000219556 1159 ntBASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Gm19073-201ENSMUST00000219978 555 ntBASIC7.25□□□□□ -1.25
Usp40Q8BWR4 AC155922.1-201ENSMUST00000220100 373 ntBASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Olfr151-202ENSMUST00000221099 929 ntBASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Mir463-201ENSMUST00000093570 75 ntBASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Olfr654-201ENSMUST00000098173 1155 ntBASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Gm7529-201ENSMUST00000213753 1897 ntBASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Usp40Q8BWR4 AC121094.1-201ENSMUST00000224766 1345 ntBASIC7.25□□□□□ -1.25
Usp40Q8BWR4 Gm42615-201ENSMUST00000197704 1820 ntBASIC7.24□□□□□ -1.25
Usp40Q8BWR4 AC107645.1-201ENSMUST00000228660 1810 ntBASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Gm37049-201ENSMUST00000194356 1983 ntBASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Gm33378-201ENSMUST00000219831 2758 ntBASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Gm6429-201ENSMUST00000117144 475 ntBASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Gm11699-201ENSMUST00000119016 401 ntBASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Gm12587-201ENSMUST00000120180 427 ntBASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Gm26312-201ENSMUST00000157769 165 ntBASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Mir1946b-201ENSMUST00000157853 133 ntBASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Gm24768-201ENSMUST00000158512 94 ntBASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Gm25019-201ENSMUST00000179732 110 ntBASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Igkv2-107-201ENSMUST00000196000 313 ntBASIC7.24□□□□□ -1.25
Usp40Q8BWR4 BX530055.1-201ENSMUST00000197285 122 ntBASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Gm4321-201ENSMUST00000200520 442 ntBASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms