Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm3160-201ENSMUST00000128343 607 ntBASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Gm26086-201ENSMUST00000157902 263 ntBASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Gm26000-201ENSMUST00000157991 107 ntBASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Gm22158-201ENSMUST00000158411 126 ntBASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Gm15508-201ENSMUST00000160330 325 ntBASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Gm6245-201ENSMUST00000164699 768 ntBASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Gm43308-201ENSMUST00000197236 373 ntBASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Gm33952-201ENSMUST00000197795 408 ntBASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Gm45171-201ENSMUST00000206360 736 ntBASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Gm45874-201ENSMUST00000212423 346 ntBASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 AC123944.2-201ENSMUST00000215290 382 ntBASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 AC157085.1-201ENSMUST00000216343 162 ntBASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 AC131720.3-201ENSMUST00000219113 275 ntBASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Gm25810-201ENSMUST00000082752 108 ntBASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 AC139754.3-201ENSMUST00000220444 1627 ntBASIC5.05□□□□□ -1.6
Chmp2bQ8BJF9 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Gm18189-201ENSMUST00000218153 1951 ntBASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Mir676-201ENSMUST00000102443 89 ntBASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Gm9435-201ENSMUST00000120379 877 ntBASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Gm23855-201ENSMUST00000158377 135 ntBASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Gm7152-201ENSMUST00000163570 605 ntBASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Gm28011-201ENSMUST00000184097 175 ntBASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Mir7072-201ENSMUST00000184542 60 ntBASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Gm18426-201ENSMUST00000191874 973 ntBASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Gm37631-201ENSMUST00000192275 364 ntBASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Gm38330-201ENSMUST00000192743 959 ntBASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Gm43036-201ENSMUST00000200594 373 ntBASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Gm45734-201ENSMUST00000211916 411 ntBASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Gm26072-201ENSMUST00000083135 107 ntBASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Gm10794-201ENSMUST00000099624 207 ntBASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 AC131068.3-201ENSMUST00000228438 1456 ntBASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 AC159308.1-201ENSMUST00000216615 1351 ntBASIC5.04□□□□□ -1.6
Chmp2bQ8BJF9 Gm38259-201ENSMUST00000194602 3534 ntBASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 105.6 ms