Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm37421-201ENSMUST00000193088 132 ntBASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm9134-201ENSMUST00000193186 551 ntBASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm18952-201ENSMUST00000194471 846 ntBASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm38334-201ENSMUST00000195060 313 ntBASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm8929-201ENSMUST00000197781 1132 ntBASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm42652-201ENSMUST00000199073 614 ntBASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm43093-201ENSMUST00000202439 1213 ntBASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm44261-201ENSMUST00000203337 209 ntBASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm8106-201ENSMUST00000213123 523 ntBASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Olfr480-201ENSMUST00000071658 1029 ntBASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm38368-201ENSMUST00000193181 1335 ntBASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Gm13118-201ENSMUST00000120402 549 ntBASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Gm23837-201ENSMUST00000122656 286 ntBASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Gm5139-201ENSMUST00000175943 249 ntBASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Gm27818-201ENSMUST00000184536 159 ntBASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Gm6717-201ENSMUST00000185549 838 ntBASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Gm6075-201ENSMUST00000186816 486 ntBASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Gm29159-201ENSMUST00000187969 379 ntBASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Gm28468-201ENSMUST00000188536 615 ntBASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Gm18864-201ENSMUST00000194518 1051 ntBASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Gm37676-201ENSMUST00000195496 507 ntBASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Gm43276-201ENSMUST00000199712 364 ntBASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Gm2926-201ENSMUST00000205625 239 ntBASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Gm44820-201ENSMUST00000207420 396 ntBASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Gm7588-201ENSMUST00000216866 571 ntBASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ccdc40Q8BI79 Gm37639-201ENSMUST00000191623 2785 ntBASIC5.21□□□□□ -1.57
Ccdc40Q8BI79 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Ccdc40Q8BI79 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
Ccdc40Q8BI79 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Ccdc40Q8BI79 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Gm15073-201ENSMUST00000117432 634 ntBASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Gm12901-201ENSMUST00000118690 532 ntBASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Gm11877-201ENSMUST00000118921 852 ntBASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Mup-ps21-201ENSMUST00000119998 448 ntBASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Gm14601-201ENSMUST00000120892 236 ntBASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Gm22958-201ENSMUST00000122512 184 ntBASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Gm16318-201ENSMUST00000162402 601 ntBASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Gm29509-201ENSMUST00000185716 321 ntBASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Gm37884-201ENSMUST00000191857 818 ntBASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Gm29813-201ENSMUST00000195856 447 ntBASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Gm42694-201ENSMUST00000196951 358 ntBASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Gm4714-201ENSMUST00000203395 279 ntBASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Gm3800-201ENSMUST00000221086 554 ntBASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 AC154576.2-203ENSMUST00000224736 253 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms