Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 Gm8748-201ENSMUST00000211125 587 ntBASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 AC131677.1-201ENSMUST00000218721 535 ntBASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 Gm36262-201ENSMUST00000223274 499 ntBASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 AC154576.2-203ENSMUST00000224736 253 ntBASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Scaf4Q6PFF0 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm12370-201ENSMUST00000117809 604 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm14885-201ENSMUST00000117969 496 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Mup-ps17-201ENSMUST00000120723 218 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm13724-201ENSMUST00000122395 1155 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm25559-201ENSMUST00000157182 74 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm25669-201ENSMUST00000157699 112 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm26271-201ENSMUST00000158349 104 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm26173-201ENSMUST00000158416 136 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm21737-201ENSMUST00000178112 664 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm20874-201ENSMUST00000178356 663 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm21744-201ENSMUST00000178403 662 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm22252-201ENSMUST00000179316 79 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm21839-201ENSMUST00000179536 378 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm20901-201ENSMUST00000180177 664 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm27185-201ENSMUST00000184296 247 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm29563-201ENSMUST00000187249 496 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm28066-201ENSMUST00000188657 472 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm28090-201ENSMUST00000189458 664 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm21647-201ENSMUST00000189755 664 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm2367-201ENSMUST00000192374 472 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 BC049739-201ENSMUST00000202626 660 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm34005-201ENSMUST00000215834 282 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 AC131720.2-201ENSMUST00000220420 431 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm10264-201ENSMUST00000220589 429 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 AC115735.5-201ENSMUST00000228386 397 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 n-R5s58-201ENSMUST00000093682 119 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm6419-201ENSMUST00000097166 429 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Scaf4Q6PFF0 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms