Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm29045-201ENSMUST00000187278 698 ntBASIC8.12□□□□□ -1.11
Clcn1Q64347 Gm37603-201ENSMUST00000192368 219 ntBASIC8.12□□□□□ -1.11
Clcn1Q64347 Gm43160-201ENSMUST00000196453 421 ntBASIC8.12□□□□□ -1.11
Clcn1Q64347 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC8.12□□□□□ -1.11
Clcn1Q64347 Gm45082-201ENSMUST00000206082 601 ntBASIC8.12□□□□□ -1.11
Clcn1Q64347 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
Clcn1Q64347 Gm45727-201ENSMUST00000212886 572 ntBASIC8.12□□□□□ -1.11
Clcn1Q64347 AC160863.1-201ENSMUST00000218412 317 ntBASIC8.12□□□□□ -1.11
Clcn1Q64347 Gm7045-201ENSMUST00000221466 605 ntBASIC8.12□□□□□ -1.11
Clcn1Q64347 AC159979.1-201ENSMUST00000227927 342 ntBASIC8.12□□□□□ -1.11
Clcn1Q64347 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Clcn1Q64347 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Clcn1Q64347 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Clcn1Q64347 Dennd6a-204ENSMUST00000224248 2775 ntBASIC8.12□□□□□ -1.11
Clcn1Q64347 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Clcn1Q64347 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Clcn1Q64347 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Clcn1Q64347 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Clcn1Q64347 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC8.12□□□□□ -1.11
Clcn1Q64347 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Clcn1Q64347 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Clcn1Q64347 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Clcn1Q64347 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clcn1Q64347 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clcn1Q64347 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clcn1Q64347 Gm21781-201ENSMUST00000178920 4838 ntBASIC8.11□□□□□ -1.11
Clcn1Q64347 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Clcn1Q64347 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clcn1Q64347 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clcn1Q64347 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Clcn1Q64347 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clcn1Q64347 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC8.11□□□□□ -1.11
Clcn1Q64347 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clcn1Q64347 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clcn1Q64347 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Clcn1Q64347 Gm23440-201ENSMUST00000104299 130 ntBASIC8.11□□□□□ -1.11
Clcn1Q64347 Mir466j-201ENSMUST00000116876 122 ntBASIC8.11□□□□□ -1.11
Clcn1Q64347 Gm15366-201ENSMUST00000118433 1019 ntBASIC8.11□□□□□ -1.11
Clcn1Q64347 Klra13-ps-201ENSMUST00000125813 802 ntBASIC8.11□□□□□ -1.11
Clcn1Q64347 Mup-ps2-201ENSMUST00000142602 533 ntBASIC8.11□□□□□ -1.11
Clcn1Q64347 Ear-ps9-201ENSMUST00000161963 460 ntBASIC8.11□□□□□ -1.11
Clcn1Q64347 Gm18199-201ENSMUST00000173820 835 ntBASIC8.11□□□□□ -1.11
Clcn1Q64347 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC8.11□□□□□ -1.11
Clcn1Q64347 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Clcn1Q64347 Gm23568-201ENSMUST00000177960 92 ntBASIC8.11□□□□□ -1.11
Clcn1Q64347 Gm24829-201ENSMUST00000179245 92 ntBASIC8.11□□□□□ -1.11
Clcn1Q64347 Gm28149-201ENSMUST00000187102 378 ntBASIC8.11□□□□□ -1.11
Clcn1Q64347 Gm28768-201ENSMUST00000189034 378 ntBASIC8.11□□□□□ -1.11
Clcn1Q64347 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Clcn1Q64347 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC8.11□□□□□ -1.11
Clcn1Q64347 Gm9710-201ENSMUST00000198053 499 ntBASIC8.11□□□□□ -1.11
Clcn1Q64347 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC8.11□□□□□ -1.11
Clcn1Q64347 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC8.11□□□□□ -1.11
Clcn1Q64347 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC8.11□□□□□ -1.11
Clcn1Q64347 Gm45438-201ENSMUST00000210242 564 ntBASIC8.11□□□□□ -1.11
Clcn1Q64347 AC122225.1-201ENSMUST00000215641 369 ntBASIC8.11□□□□□ -1.11
Clcn1Q64347 Gm4510-201ENSMUST00000218265 427 ntBASIC8.11□□□□□ -1.11
Clcn1Q64347 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clcn1Q64347 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC8.11□□□□□ -1.11
Clcn1Q64347 Gm7204-201ENSMUST00000062591 600 ntBASIC8.11□□□□□ -1.11
Clcn1Q64347 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC8.11□□□□□ -1.11
Clcn1Q64347 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Clcn1Q64347 Gm43266-201ENSMUST00000201049 1771 ntBASIC8.11□□□□□ -1.11
Clcn1Q64347 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC8.11□□□□□ -1.11
Clcn1Q64347 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Clcn1Q64347 Gm38156-201ENSMUST00000194601 2260 ntBASIC8.11□□□□□ -1.11
Clcn1Q64347 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clcn1Q64347 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clcn1Q64347 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clcn1Q64347 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clcn1Q64347 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clcn1Q64347 Gm45297-201ENSMUST00000209893 3483 ntBASIC8.11□□□□□ -1.11
Clcn1Q64347 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Clcn1Q64347 Gm12633-201ENSMUST00000117742 1705 ntBASIC8.11□□□□□ -1.11
Clcn1Q64347 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Clcn1Q64347 Gm37255-201ENSMUST00000193302 3060 ntBASIC8.11□□□□□ -1.11
Clcn1Q64347 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clcn1Q64347 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clcn1Q64347 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
Clcn1Q64347 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC8.1□□□□□ -1.11
Clcn1Q64347 AC152922.2-201ENSMUST00000213353 3879 ntBASIC8.1□□□□□ -1.11
Clcn1Q64347 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Clcn1Q64347 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Clcn1Q64347 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Clcn1Q64347 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Clcn1Q64347 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Clcn1Q64347 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Clcn1Q64347 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC8.1□□□□□ -1.11
Clcn1Q64347 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Clcn1Q64347 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Clcn1Q64347 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Clcn1Q64347 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Clcn1Q64347 Gm25795-201ENSMUST00000104421 132 ntBASIC8.1□□□□□ -1.11
Clcn1Q64347 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Clcn1Q64347 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC8.1□□□□□ -1.11
Clcn1Q64347 Gm8534-201ENSMUST00000118553 766 ntBASIC8.1□□□□□ -1.11
Clcn1Q64347 Gm11976-201ENSMUST00000119236 295 ntBASIC8.1□□□□□ -1.11
Clcn1Q64347 Gm25292-201ENSMUST00000122797 322 ntBASIC8.1□□□□□ -1.11
Clcn1Q64347 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC8.1□□□□□ -1.11
Clcn1Q64347 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms