Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Upf3aQ3ULJ3 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Upf3aQ3ULJ3 AC151904.4-201ENSMUST00000219868 1319 ntBASIC5.14□□□□□ -1.59
Upf3aQ3ULJ3 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Upf3aQ3ULJ3 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Upf3aQ3ULJ3 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Upf3aQ3ULJ3 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Upf3aQ3ULJ3 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.14□□□□□ -1.59
Upf3aQ3ULJ3 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Gm5715-201ENSMUST00000196854 1465 ntBASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Gm37780-201ENSMUST00000194117 1873 ntBASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Gm42528-201ENSMUST00000200697 3418 ntBASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Gm14172-201ENSMUST00000118255 644 ntBASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Gm14930-201ENSMUST00000118864 652 ntBASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Gm16259-201ENSMUST00000145241 553 ntBASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Gm23501-201ENSMUST00000157744 256 ntBASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Gm22326-201ENSMUST00000158897 351 ntBASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Gm10087-201ENSMUST00000167650 330 ntBASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Gm6155-201ENSMUST00000173735 341 ntBASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Rab26os-201ENSMUST00000176215 477 ntBASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Gm21959-201ENSMUST00000178439 452 ntBASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Gm29138-201ENSMUST00000191444 348 ntBASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Gm37492-201ENSMUST00000191948 376 ntBASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Gm45845-201ENSMUST00000207326 582 ntBASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 AC131720.3-201ENSMUST00000219113 275 ntBASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 AV026068-237ENSMUST00000226075 572 ntBASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Upf3aQ3ULJ3 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Gm14628-201ENSMUST00000117508 635 ntBASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Gm12005-201ENSMUST00000121451 379 ntBASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Gm16107-201ENSMUST00000162523 862 ntBASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Mir5128-201ENSMUST00000175217 84 ntBASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Mir6975-201ENSMUST00000184879 61 ntBASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Gm44694-201ENSMUST00000205317 1298 ntBASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 AC154198.1-201ENSMUST00000222839 424 ntBASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Mecom-201ENSMUST00000061088 348 ntBASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Gm38264-201ENSMUST00000194850 2032 ntBASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Upf3aQ3ULJ3 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Gm11251-201ENSMUST00000119593 2800 ntBASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Upf3aQ3ULJ3 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms