Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Usp39Q3TIX9 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Usp39Q3TIX9 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Usp39Q3TIX9 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Usp39Q3TIX9 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Usp39Q3TIX9 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.45□□□□□ -1.54
Usp39Q3TIX9 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Usp39Q3TIX9 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Usp39Q3TIX9 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Usp39Q3TIX9 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Usp39Q3TIX9 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm25647-201ENSMUST00000101832 78 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm25823-201ENSMUST00000101995 78 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm25422-201ENSMUST00000104219 129 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm13866-201ENSMUST00000118901 968 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm13751-201ENSMUST00000120280 752 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm8545-201ENSMUST00000120692 801 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm12494-201ENSMUST00000121684 521 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm14411-201ENSMUST00000121798 914 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm13363-201ENSMUST00000122008 522 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm22724-201ENSMUST00000158091 127 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm22160-201ENSMUST00000158405 328 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm8224-201ENSMUST00000166178 497 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm18417-201ENSMUST00000176564 648 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm24220-201ENSMUST00000177753 79 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm25988-201ENSMUST00000177759 79 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm23471-201ENSMUST00000177886 79 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm26488-201ENSMUST00000178225 79 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm23449-201ENSMUST00000179208 79 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm25221-201ENSMUST00000180051 79 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm7745-201ENSMUST00000182235 973 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm27409-201ENSMUST00000184727 80 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm29413-201ENSMUST00000186019 880 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm29159-201ENSMUST00000187969 379 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Mrgprb13-201ENSMUST00000188191 985 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm28414-201ENSMUST00000190111 294 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm37884-201ENSMUST00000191857 818 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm37979-201ENSMUST00000193065 712 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm37010-201ENSMUST00000194539 1704 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm9236-201ENSMUST00000196892 587 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Igkv3-8-201ENSMUST00000197635 339 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Igkv12-66-201ENSMUST00000199305 348 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm42961-201ENSMUST00000202023 181 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm43227-201ENSMUST00000202239 677 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm44773-201ENSMUST00000207374 557 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm45870-201ENSMUST00000211269 601 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 AC138284.5-201ENSMUST00000214389 652 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 AC192333.6-201ENSMUST00000224565 725 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 AC154595.2-201ENSMUST00000225067 310 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Olfr192-201ENSMUST00000080251 925 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Mir133b-201ENSMUST00000083546 119 ntBASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Usp39Q3TIX9 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Usp39Q3TIX9 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Usp39Q3TIX9 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Usp39Q3TIX9 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Usp39Q3TIX9 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Usp39Q3TIX9 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Usp39Q3TIX9 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms