Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Col17a1Q07563 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Col17a1Q07563 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col17a1Q07563 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Col17a1Q07563 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col17a1Q07563 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col17a1Q07563 Gm44901-201ENSMUST00000208157 3977 ntBASIC7.79□□□□□ -1.16
Col17a1Q07563 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col17a1Q07563 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC7.79□□□□□ -1.16
Col17a1Q07563 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col17a1Q07563 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col17a1Q07563 Gm15058-201ENSMUST00000117689 458 ntBASIC7.79□□□□□ -1.16
Col17a1Q07563 Gm23168-201ENSMUST00000157156 143 ntBASIC7.79□□□□□ -1.16
Col17a1Q07563 Gm25386-201ENSMUST00000157814 288 ntBASIC7.79□□□□□ -1.16
Col17a1Q07563 Gm25037-201ENSMUST00000175418 110 ntBASIC7.79□□□□□ -1.16
Col17a1Q07563 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC7.79□□□□□ -1.16
Col17a1Q07563 Gm28195-201ENSMUST00000186992 372 ntBASIC7.79□□□□□ -1.16
Col17a1Q07563 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC7.79□□□□□ -1.16
Col17a1Q07563 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC7.79□□□□□ -1.16
Col17a1Q07563 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col17a1Q07563 Gm44402-201ENSMUST00000203677 238 ntBASIC7.79□□□□□ -1.16
Col17a1Q07563 Gm44583-201ENSMUST00000207478 281 ntBASIC7.79□□□□□ -1.16
Col17a1Q07563 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC7.79□□□□□ -1.16
Col17a1Q07563 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC7.79□□□□□ -1.16
Col17a1Q07563 AC153526.4-201ENSMUST00000217713 379 ntBASIC7.79□□□□□ -1.16
Col17a1Q07563 Gm7034-201ENSMUST00000218638 645 ntBASIC7.79□□□□□ -1.16
Col17a1Q07563 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col17a1Q07563 CT025556.1-201ENSMUST00000222965 1884 ntBASIC7.79□□□□□ -1.16
Col17a1Q07563 Gm2645-201ENSMUST00000223516 547 ntBASIC7.79□□□□□ -1.16
Col17a1Q07563 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col17a1Q07563 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Col17a1Q07563 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC7.79□□□□□ -1.16
Col17a1Q07563 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Col17a1Q07563 Gm26437-201ENSMUST00000082595 105 ntBASIC7.79□□□□□ -1.16
Col17a1Q07563 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Col17a1Q07563 Gm44695-201ENSMUST00000205567 1631 ntBASIC7.79□□□□□ -1.16
Col17a1Q07563 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col17a1Q07563 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col17a1Q07563 Gm43953-201ENSMUST00000203709 2867 ntBASIC7.79□□□□□ -1.16
Col17a1Q07563 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col17a1Q07563 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC7.78□□□□□ -1.16
Col17a1Q07563 Gm38062-201ENSMUST00000192541 1856 ntBASIC7.78□□□□□ -1.16
Col17a1Q07563 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Col17a1Q07563 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col17a1Q07563 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col17a1Q07563 Gm13438-201ENSMUST00000120100 573 ntBASIC7.78□□□□□ -1.16
Col17a1Q07563 Gm24251-201ENSMUST00000157324 114 ntBASIC7.78□□□□□ -1.16
Col17a1Q07563 Gm17121-201ENSMUST00000170414 847 ntBASIC7.78□□□□□ -1.16
Col17a1Q07563 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC7.78□□□□□ -1.16
Col17a1Q07563 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col17a1Q07563 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col17a1Q07563 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col17a1Q07563 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col17a1Q07563 Gm17222-201ENSMUST00000180135 847 ntBASIC7.78□□□□□ -1.16
Col17a1Q07563 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col17a1Q07563 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC7.78□□□□□ -1.16
Col17a1Q07563 Gm38201-201ENSMUST00000192143 387 ntBASIC7.78□□□□□ -1.16
Col17a1Q07563 AC158142.1-201ENSMUST00000226721 416 ntBASIC7.78□□□□□ -1.16
Col17a1Q07563 AC122035.2-201ENSMUST00000228698 462 ntBASIC7.78□□□□□ -1.16
Col17a1Q07563 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC7.78□□□□□ -1.16
Col17a1Q07563 AC130827.1-201ENSMUST00000220476 3850 ntBASIC7.78□□□□□ -1.16
Col17a1Q07563 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col17a1Q07563 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC7.78□□□□□ -1.16
Col17a1Q07563 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC7.78□□□□□ -1.16
Col17a1Q07563 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col17a1Q07563 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col17a1Q07563 Gm45324-201ENSMUST00000211193 5638 ntBASIC7.77□□□□□ -1.16
Col17a1Q07563 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.16
Col17a1Q07563 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Col17a1Q07563 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.17
Col17a1Q07563 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Col17a1Q07563 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Col17a1Q07563 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC7.77□□□□□ -1.17
Col17a1Q07563 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC7.77□□□□□ -1.17
Col17a1Q07563 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC7.77□□□□□ -1.17
Col17a1Q07563 Gm15534-201ENSMUST00000137642 562 ntBASIC7.77□□□□□ -1.17
Col17a1Q07563 Gm18358-201ENSMUST00000173179 1277 ntBASIC7.77□□□□□ -1.17
Col17a1Q07563 Gm28314-201ENSMUST00000191276 345 ntBASIC7.77□□□□□ -1.17
Col17a1Q07563 Gm43929-201ENSMUST00000203025 409 ntBASIC7.77□□□□□ -1.17
Col17a1Q07563 Gm7443-201ENSMUST00000206355 378 ntBASIC7.77□□□□□ -1.17
Col17a1Q07563 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC7.77□□□□□ -1.17
Col17a1Q07563 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC7.77□□□□□ -1.17
Col17a1Q07563 AC124420.1-201ENSMUST00000219779 791 ntBASIC7.77□□□□□ -1.17
Col17a1Q07563 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col17a1Q07563 AC122448.1-201ENSMUST00000226317 772 ntBASIC7.77□□□□□ -1.17
Col17a1Q07563 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col17a1Q07563 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC7.77□□□□□ -1.17
Col17a1Q07563 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.17
Col17a1Q07563 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC7.77□□□□□ -1.17
Col17a1Q07563 AC121094.1-201ENSMUST00000224766 1345 ntBASIC7.77□□□□□ -1.17
Col17a1Q07563 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col17a1Q07563 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Col17a1Q07563 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col17a1Q07563 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col17a1Q07563 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col17a1Q07563 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col17a1Q07563 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Col17a1Q07563 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC7.77□□□□□ -1.17
Col17a1Q07563 Gm42968-201ENSMUST00000198578 1372 ntBASIC7.77□□□□□ -1.17
Col17a1Q07563 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms