Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm43631-201ENSMUST00000202011 369 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm45316-201ENSMUST00000210128 162 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm45777-201ENSMUST00000213009 301 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 AC158803.2-201ENSMUST00000219452 679 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Olfr923-204ENSMUST00000219798 1068 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 CT030135.1-201ENSMUST00000223760 570 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 AC124524.2-201ENSMUST00000223940 588 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 AC167140.1-201ENSMUST00000224710 403 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Col8a1Q00780 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Col8a1Q00780 Mir181a-1-201ENSMUST00000083631 87 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm24254-201ENSMUST00000083702 104 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
Col8a1Q00780 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Col8a1Q00780 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a1Q00780 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col8a1Q00780 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a1Q00780 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a1Q00780 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a1Q00780 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a1Q00780 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a1Q00780 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Col8a1Q00780 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Col8a1Q00780 Gm44677-201ENSMUST00000209151 3739 ntBASIC5.21□□□□□ -1.57
Col8a1Q00780 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Col8a1Q00780 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Col8a1Q00780 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a1Q00780 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a1Q00780 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Col8a1Q00780 Gm37086-201ENSMUST00000193082 3452 ntBASIC5.21□□□□□ -1.58
Col8a1Q00780 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Col8a1Q00780 Gm24855-201ENSMUST00000104848 97 ntBASIC5.21□□□□□ -1.58
Col8a1Q00780 Gm8534-201ENSMUST00000118553 766 ntBASIC5.21□□□□□ -1.58
Col8a1Q00780 Gm14175-201ENSMUST00000119835 241 ntBASIC5.21□□□□□ -1.58
Col8a1Q00780 Gm11522-201ENSMUST00000120533 176 ntBASIC5.21□□□□□ -1.58
Col8a1Q00780 Mup-ps17-201ENSMUST00000120723 218 ntBASIC5.21□□□□□ -1.58
Col8a1Q00780 Gm12041-201ENSMUST00000121606 602 ntBASIC5.21□□□□□ -1.58
Col8a1Q00780 Gm26372-201ENSMUST00000157831 236 ntBASIC5.21□□□□□ -1.58
Col8a1Q00780 Mir1970-201ENSMUST00000157839 104 ntBASIC5.21□□□□□ -1.58
Col8a1Q00780 Gm22101-201ENSMUST00000157928 103 ntBASIC5.21□□□□□ -1.58
Col8a1Q00780 Gm25439-201ENSMUST00000158280 131 ntBASIC5.21□□□□□ -1.58
Col8a1Q00780 Gm23352-201ENSMUST00000158428 64 ntBASIC5.21□□□□□ -1.58
Col8a1Q00780 Gm29490-201ENSMUST00000190923 342 ntBASIC5.21□□□□□ -1.58
Col8a1Q00780 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC5.21□□□□□ -1.58
Col8a1Q00780 Gm37235-201ENSMUST00000195171 59 ntBASIC5.21□□□□□ -1.58
Col8a1Q00780 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC5.21□□□□□ -1.58
Col8a1Q00780 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC5.21□□□□□ -1.58
Col8a1Q00780 Gm44266-201ENSMUST00000205235 500 ntBASIC5.21□□□□□ -1.58
Col8a1Q00780 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.21□□□□□ -1.58
Col8a1Q00780 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC5.21□□□□□ -1.58
Col8a1Q00780 Gm8911-201ENSMUST00000213986 652 ntBASIC5.21□□□□□ -1.58
Col8a1Q00780 AC132384.9-201ENSMUST00000218085 277 ntBASIC5.21□□□□□ -1.58
Col8a1Q00780 AC132384.5-201ENSMUST00000218562 226 ntBASIC5.21□□□□□ -1.58
Col8a1Q00780 AC160970.1-201ENSMUST00000219311 475 ntBASIC5.21□□□□□ -1.58
Col8a1Q00780 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC5.21□□□□□ -1.58
Col8a1Q00780 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC5.21□□□□□ -1.58
Col8a1Q00780 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.21□□□□□ -1.58
Col8a1Q00780 CT030662.3-201ENSMUST00000228751 476 ntBASIC5.21□□□□□ -1.58
Col8a1Q00780 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col8a1Q00780 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col8a1Q00780 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col8a1Q00780 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
Col8a1Q00780 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col8a1Q00780 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col8a1Q00780 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col8a1Q00780 Gm25079-201ENSMUST00000082529 203 ntBASIC5.21□□□□□ -1.58
Col8a1Q00780 Gm24405-201ENSMUST00000083033 167 ntBASIC5.21□□□□□ -1.58
Col8a1Q00780 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a1Q00780 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a1Q00780 AC167013.5-201ENSMUST00000227597 2947 ntBASIC5.21□□□□□ -1.58
Col8a1Q00780 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a1Q00780 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.21□□□□□ -1.58
Col8a1Q00780 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a1Q00780 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a1Q00780 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a1Q00780 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a1Q00780 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a1Q00780 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a1Q00780 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Col8a1Q00780 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a1Q00780 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a1Q00780 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a1Q00780 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a1Q00780 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a1Q00780 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col8a1Q00780 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC5.2□□□□□ -1.58
Col8a1Q00780 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col8a1Q00780 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a1Q00780 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms