Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NcanP55066 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NcanP55066 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NcanP55066 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NcanP55066 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.35□□□□□ -1.55
NcanP55066 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NcanP55066 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
NcanP55066 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
NcanP55066 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.34□□□□□ -1.55
NcanP55066 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC5.34□□□□□ -1.55
NcanP55066 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.34□□□□□ -1.55
NcanP55066 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
NcanP55066 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
NcanP55066 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NcanP55066 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NcanP55066 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NcanP55066 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NcanP55066 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NcanP55066 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NcanP55066 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC5.34□□□□□ -1.55
NcanP55066 Gm649-201ENSMUST00000117284 1054 ntBASIC5.34□□□□□ -1.55
NcanP55066 Gm12717-201ENSMUST00000118427 983 ntBASIC5.34□□□□□ -1.55
NcanP55066 Gm12401-201ENSMUST00000118435 228 ntBASIC5.34□□□□□ -1.55
NcanP55066 Gm12677-201ENSMUST00000118668 426 ntBASIC5.34□□□□□ -1.55
NcanP55066 Klra14-ps-201ENSMUST00000119532 802 ntBASIC5.34□□□□□ -1.55
NcanP55066 Gm15390-201ENSMUST00000120323 738 ntBASIC5.34□□□□□ -1.55
NcanP55066 Gm13484-201ENSMUST00000120738 412 ntBASIC5.34□□□□□ -1.55
NcanP55066 Gm12005-201ENSMUST00000121451 379 ntBASIC5.34□□□□□ -1.55
NcanP55066 Gm13440-201ENSMUST00000121665 496 ntBASIC5.34□□□□□ -1.55
NcanP55066 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NcanP55066 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC5.34□□□□□ -1.55
NcanP55066 Gm26828-201ENSMUST00000180640 172 ntBASIC5.34□□□□□ -1.55
NcanP55066 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC5.34□□□□□ -1.55
NcanP55066 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.34□□□□□ -1.55
NcanP55066 Gm29592-201ENSMUST00000189434 370 ntBASIC5.34□□□□□ -1.55
NcanP55066 Gm19124-201ENSMUST00000191041 832 ntBASIC5.34□□□□□ -1.55
NcanP55066 Gm42776-201ENSMUST00000198031 406 ntBASIC5.34□□□□□ -1.55
NcanP55066 Gm18452-201ENSMUST00000202968 1111 ntBASIC5.34□□□□□ -1.55
NcanP55066 Gm43894-201ENSMUST00000203274 688 ntBASIC5.34□□□□□ -1.55
NcanP55066 Gm19039-201ENSMUST00000204363 575 ntBASIC5.34□□□□□ -1.55
NcanP55066 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.34□□□□□ -1.55
NcanP55066 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NcanP55066 Gm45434-201ENSMUST00000210550 293 ntBASIC5.34□□□□□ -1.55
NcanP55066 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.34□□□□□ -1.55
NcanP55066 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC5.34□□□□□ -1.55
NcanP55066 CT009764.1-201ENSMUST00000222260 483 ntBASIC5.34□□□□□ -1.55
NcanP55066 Mir365-2-201ENSMUST00000083555 112 ntBASIC5.34□□□□□ -1.55
NcanP55066 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NcanP55066 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NcanP55066 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NcanP55066 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NcanP55066 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
NcanP55066 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
NcanP55066 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
NcanP55066 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.34□□□□□ -1.56
NcanP55066 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
NcanP55066 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
NcanP55066 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
NcanP55066 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
NcanP55066 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NcanP55066 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NcanP55066 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NcanP55066 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
NcanP55066 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
NcanP55066 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NcanP55066 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
NcanP55066 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NcanP55066 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NcanP55066 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NcanP55066 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NcanP55066 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NcanP55066 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC5.33□□□□□ -1.56
NcanP55066 Gm13932-201ENSMUST00000120873 610 ntBASIC5.33□□□□□ -1.56
NcanP55066 Gm14710-201ENSMUST00000146082 1066 ntBASIC5.33□□□□□ -1.56
NcanP55066 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.33□□□□□ -1.56
NcanP55066 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NcanP55066 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC5.33□□□□□ -1.56
NcanP55066 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC5.33□□□□□ -1.56
NcanP55066 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC5.33□□□□□ -1.56
NcanP55066 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.33□□□□□ -1.56
NcanP55066 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC5.33□□□□□ -1.56
NcanP55066 Gm17916-202ENSMUST00000187634 1187 ntBASIC5.33□□□□□ -1.56
NcanP55066 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NcanP55066 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC5.33□□□□□ -1.56
NcanP55066 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC5.33□□□□□ -1.56
NcanP55066 AC118230.1-201ENSMUST00000220196 656 ntBASIC5.33□□□□□ -1.56
NcanP55066 AL590503.1-201ENSMUST00000222053 321 ntBASIC5.33□□□□□ -1.56
NcanP55066 AC154371.1-201ENSMUST00000226600 412 ntBASIC5.33□□□□□ -1.56
NcanP55066 AC164437.2-201ENSMUST00000228915 797 ntBASIC5.33□□□□□ -1.56
NcanP55066 n-R5s166-201ENSMUST00000082898 121 ntBASIC5.33□□□□□ -1.56
NcanP55066 Mir20a-201ENSMUST00000083508 107 ntBASIC5.33□□□□□ -1.56
NcanP55066 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NcanP55066 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NcanP55066 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NcanP55066 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.33□□□□□ -1.56
NcanP55066 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NcanP55066 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NcanP55066 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NcanP55066 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.33□□□□□ -1.56
NcanP55066 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms