Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm3816-201ENSMUST00000209803 433 ntBASIC4.74□□□□□ -1.65
Sox3P53784 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.74□□□□□ -1.65
Sox3P53784 AC155266.1-201ENSMUST00000220762 904 ntBASIC4.74□□□□□ -1.65
Sox3P53784 AC132433.1-201ENSMUST00000221553 1101 ntBASIC4.74□□□□□ -1.65
Sox3P53784 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC4.74□□□□□ -1.65
Sox3P53784 CT025689.2-201ENSMUST00000224979 429 ntBASIC4.74□□□□□ -1.65
Sox3P53784 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sox3P53784 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sox3P53784 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sox3P53784 Gm24763-201ENSMUST00000083688 190 ntBASIC4.74□□□□□ -1.65
Sox3P53784 Gm23875-201ENSMUST00000083711 318 ntBASIC4.74□□□□□ -1.65
Sox3P53784 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
Sox3P53784 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Sox3P53784 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Sox3P53784 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC4.74□□□□□ -1.65
Sox3P53784 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sox3P53784 AC154573.1-201ENSMUST00000225913 4659 ntBASIC4.74□□□□□ -1.65
Sox3P53784 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sox3P53784 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.74□□□□□ -1.65
Sox3P53784 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Sox3P53784 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Sox3P53784 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Sox3P53784 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.73□□□□□ -1.65
Sox3P53784 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sox3P53784 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sox3P53784 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sox3P53784 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Sox3P53784 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sox3P53784 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC4.73□□□□□ -1.65
Sox3P53784 Gm37890-201ENSMUST00000195610 3992 ntBASIC4.73□□□□□ -1.65
Sox3P53784 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sox3P53784 Gm37010-201ENSMUST00000194539 1704 ntBASIC4.73□□□□□ -1.65
Sox3P53784 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sox3P53784 Gm14628-201ENSMUST00000117508 635 ntBASIC4.73□□□□□ -1.65
Sox3P53784 Gm14790-201ENSMUST00000117760 1293 ntBASIC4.73□□□□□ -1.65
Sox3P53784 Gm13787-201ENSMUST00000120422 168 ntBASIC4.73□□□□□ -1.65
Sox3P53784 Gm17014-201ENSMUST00000120765 168 ntBASIC4.73□□□□□ -1.65
Sox3P53784 Gm14369-201ENSMUST00000121355 285 ntBASIC4.73□□□□□ -1.65
Sox3P53784 Gm12422-201ENSMUST00000121431 302 ntBASIC4.73□□□□□ -1.65
Sox3P53784 Gm7840-201ENSMUST00000122086 533 ntBASIC4.73□□□□□ -1.65
Sox3P53784 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC4.73□□□□□ -1.65
Sox3P53784 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC4.73□□□□□ -1.65
Sox3P53784 Gm22730-201ENSMUST00000158085 171 ntBASIC4.73□□□□□ -1.65
Sox3P53784 Mir3473a-201ENSMUST00000175011 78 ntBASIC4.73□□□□□ -1.65
Sox3P53784 Gm20673-201ENSMUST00000177167 430 ntBASIC4.73□□□□□ -1.65
Sox3P53784 Gm21959-201ENSMUST00000178439 452 ntBASIC4.73□□□□□ -1.65
Sox3P53784 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC4.73□□□□□ -1.65
Sox3P53784 Gm37088-201ENSMUST00000193887 406 ntBASIC4.73□□□□□ -1.65
Sox3P53784 Gm20239-201ENSMUST00000196610 982 ntBASIC4.73□□□□□ -1.65
Sox3P53784 Gm43237-201ENSMUST00000196835 1044 ntBASIC4.73□□□□□ -1.65
Sox3P53784 Gm43717-201ENSMUST00000198684 310 ntBASIC4.73□□□□□ -1.65
Sox3P53784 Gm44559-201ENSMUST00000207177 1012 ntBASIC4.73□□□□□ -1.65
Sox3P53784 Gm6850-201ENSMUST00000210031 530 ntBASIC4.73□□□□□ -1.65
Sox3P53784 Gm45789-201ENSMUST00000213038 364 ntBASIC4.73□□□□□ -1.65
Sox3P53784 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Sox3P53784 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.73□□□□□ -1.65
Sox3P53784 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sox3P53784 Gm25134-201ENSMUST00000082646 160 ntBASIC4.73□□□□□ -1.65
Sox3P53784 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Sox3P53784 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Sox3P53784 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sox3P53784 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Sox3P53784 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sox3P53784 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sox3P53784 AC123705.3-201ENSMUST00000223531 2069 ntBASIC4.73□□□□□ -1.65
Sox3P53784 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Sox3P53784 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sox3P53784 Gm37558-201ENSMUST00000193684 2983 ntBASIC4.72□□□□□ -1.65
Sox3P53784 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Sox3P53784 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Sox3P53784 Gm14711-201ENSMUST00000117056 217 ntBASIC4.72□□□□□ -1.65
Sox3P53784 Gm13733-201ENSMUST00000117290 535 ntBASIC4.72□□□□□ -1.65
Sox3P53784 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC4.72□□□□□ -1.65
Sox3P53784 Gm7312-201ENSMUST00000118798 469 ntBASIC4.72□□□□□ -1.65
Sox3P53784 Gm14930-201ENSMUST00000118864 652 ntBASIC4.72□□□□□ -1.65
Sox3P53784 Gm14656-201ENSMUST00000120342 502 ntBASIC4.72□□□□□ -1.65
Sox3P53784 Gm13484-201ENSMUST00000120738 412 ntBASIC4.72□□□□□ -1.65
Sox3P53784 Gm5383-201ENSMUST00000121177 617 ntBASIC4.72□□□□□ -1.65
Sox3P53784 n-R5s21-201ENSMUST00000122692 117 ntBASIC4.72□□□□□ -1.65
Sox3P53784 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Sox3P53784 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Sox3P53784 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.72□□□□□ -1.65
Sox3P53784 Gm26362-201ENSMUST00000158865 315 ntBASIC4.72□□□□□ -1.65
Sox3P53784 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Sox3P53784 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
Sox3P53784 Gm8614-201ENSMUST00000182528 978 ntBASIC4.72□□□□□ -1.65
Sox3P53784 Gm27492-201ENSMUST00000185194 187 ntBASIC4.72□□□□□ -1.65
Sox3P53784 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
Sox3P53784 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC4.72□□□□□ -1.65
Sox3P53784 Trbv27-201ENSMUST00000193711 277 ntBASIC4.72□□□□□ -1.65
Sox3P53784 Gm37173-201ENSMUST00000194498 1017 ntBASIC4.72□□□□□ -1.65
Sox3P53784 Gm37167-201ENSMUST00000194946 396 ntBASIC4.72□□□□□ -1.65
Sox3P53784 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC4.72□□□□□ -1.65
Sox3P53784 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC4.72□□□□□ -1.65
Sox3P53784 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.72□□□□□ -1.65
Sox3P53784 AC154198.1-201ENSMUST00000222839 424 ntBASIC4.72□□□□□ -1.65
Sox3P53784 AC132112.1-201ENSMUST00000226354 505 ntBASIC4.72□□□□□ -1.65
Sox3P53784 AC154838.2-201ENSMUST00000226602 747 ntBASIC4.72□□□□□ -1.65
Sox3P53784 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sox3P53784 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms