Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC7.06□□□□□ -1.28
Rfx1P48377 AC122459.2-201ENSMUST00000227099 638 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 AC109172.2-201ENSMUST00000228792 381 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 Gm5229-201ENSMUST00000039375 354 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rfx1P48377 Gm7887-201ENSMUST00000056948 537 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rfx1P48377 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Rfx1P48377 Gm24041-201ENSMUST00000083115 156 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 Gm11290-204ENSMUST00000224688 3042 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Rfx1P48377 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Rfx1P48377 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rfx1P48377 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rfx1P48377 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rfx1P48377 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rfx1P48377 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rfx1P48377 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rfx1P48377 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Rfx1P48377 AC167192.3-201ENSMUST00000224096 1567 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rfx1P48377 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Rfx1P48377 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Rfx1P48377 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC7.06□□□□□ -1.28
Rfx1P48377 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rfx1P48377 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Rfx1P48377 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
Rfx1P48377 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Rfx1P48377 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
Rfx1P48377 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Rfx1P48377 AC164102.1-201ENSMUST00000220524 1553 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 AC153144.1-201ENSMUST00000221759 3139 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Rfx1P48377 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Rfx1P48377 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Rfx1P48377 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Rfx1P48377 Gm7146-201ENSMUST00000116079 739 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 Gm22714-201ENSMUST00000116894 78 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 Gm13991-201ENSMUST00000120190 648 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 Gm12308-201ENSMUST00000120440 389 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 Gm14925-201ENSMUST00000120611 438 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 Gm15801-201ENSMUST00000120920 522 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 Gm15840-201ENSMUST00000122099 943 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC7.05□□□□□ -1.28
Rfx1P48377 Gm22755-201ENSMUST00000157143 100 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 Gm24682-201ENSMUST00000158764 137 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 Gm26159-201ENSMUST00000158968 104 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 Gm8783-201ENSMUST00000159764 522 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Rfx1P48377 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Rfx1P48377 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC7.05□□□□□ -1.28
Rfx1P48377 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC7.05□□□□□ -1.28
Rfx1P48377 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC7.05□□□□□ -1.28
Rfx1P48377 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC7.05□□□□□ -1.28
Rfx1P48377 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC7.05□□□□□ -1.28
Rfx1P48377 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC7.05□□□□□ -1.28
Rfx1P48377 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC7.05□□□□□ -1.28
Rfx1P48377 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC7.05□□□□□ -1.28
Rfx1P48377 Gm18700-201ENSMUST00000185791 553 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Rfx1P48377 Gm20871-201ENSMUST00000191322 931 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 Gm34015-201ENSMUST00000194908 451 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC7.05□□□□□ -1.28
Rfx1P48377 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Rfx1P48377 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC7.05□□□□□ -1.28
Rfx1P48377 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
Rfx1P48377 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Rfx1P48377 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 Gm7890-201ENSMUST00000204877 601 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC7.05□□□□□ -1.28
Rfx1P48377 Gm7128-201ENSMUST00000211639 533 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 CT485607.3-201ENSMUST00000213361 672 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 CT009527.2-201ENSMUST00000225386 606 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 CT025552.2-201ENSMUST00000225497 317 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 AC133176.1-201ENSMUST00000226668 219 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 AC151907.1-201ENSMUST00000228812 412 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 Gm9762-201ENSMUST00000036976 444 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 Gm5582-201ENSMUST00000075251 522 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Rfx1P48377 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Rfx1P48377 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Rfx1P48377 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Rfx1P48377 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Rfx1P48377 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Rfx1P48377 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Rfx1P48377 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Rfx1P48377 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Rfx1P48377 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Rfx1P48377 AC121942.1-201ENSMUST00000224459 2891 ntBASIC7.05□□□□□ -1.28
Rfx1P48377 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Rfx1P48377 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC7.05□□□□□ -1.28
Rfx1P48377 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Rfx1P48377 Gm38189-201ENSMUST00000194495 1457 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC7.04□□□□□ -1.28
Rfx1P48377 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rfx1P48377 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms