Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Tnfsf4P43488 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Tnfsf4P43488 Gm28118-201ENSMUST00000185957 294 ntBASIC4.44□□□□□ -1.7
Tnfsf4P43488 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Tnfsf4P43488 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Tnfsf4P43488 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC4.44□□□□□ -1.7
Tnfsf4P43488 Gm18409-202ENSMUST00000220105 529 ntBASIC4.44□□□□□ -1.7
Tnfsf4P43488 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC4.44□□□□□ -1.7
Tnfsf4P43488 Gm36501-201ENSMUST00000221857 745 ntBASIC4.44□□□□□ -1.7
Tnfsf4P43488 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Tnfsf4P43488 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Tnfsf4P43488 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Tnfsf4P43488 Gm42520-201ENSMUST00000199642 1502 ntBASIC4.44□□□□□ -1.7
Tnfsf4P43488 Fus-202ENSMUST00000079045 2623 ntBASIC4.44□□□□□ -1.7
Tnfsf4P43488 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Tnfsf4P43488 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Tnfsf4P43488 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
Tnfsf4P43488 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Tnfsf4P43488 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Tnfsf4P43488 Gm38307-201ENSMUST00000195630 1840 ntBASIC4.44□□□□□ -1.7
Tnfsf4P43488 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Tnfsf4P43488 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
Tnfsf4P43488 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Tnfsf4P43488 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC4.43□□□□□ -1.7
Tnfsf4P43488 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Tnfsf4P43488 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.43□□□□□ -1.7
Tnfsf4P43488 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Tnfsf4P43488 Gm23709-201ENSMUST00000104364 130 ntBASIC4.43□□□□□ -1.7
Tnfsf4P43488 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Tnfsf4P43488 Gm12231-201ENSMUST00000119447 695 ntBASIC4.43□□□□□ -1.7
Tnfsf4P43488 Mir1903-201ENSMUST00000122574 80 ntBASIC4.43□□□□□ -1.7
Tnfsf4P43488 Gm16254-201ENSMUST00000131528 730 ntBASIC4.43□□□□□ -1.7
Tnfsf4P43488 Gm26098-201ENSMUST00000157247 288 ntBASIC4.43□□□□□ -1.7
Tnfsf4P43488 Gm24774-201ENSMUST00000157384 134 ntBASIC4.43□□□□□ -1.7
Tnfsf4P43488 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC4.43□□□□□ -1.7
Tnfsf4P43488 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Tnfsf4P43488 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC4.43□□□□□ -1.7
Tnfsf4P43488 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC4.43□□□□□ -1.7
Tnfsf4P43488 Gm20428-201ENSMUST00000174365 283 ntBASIC4.43□□□□□ -1.7
Tnfsf4P43488 Gm27551-201ENSMUST00000184258 77 ntBASIC4.43□□□□□ -1.7
Tnfsf4P43488 Gm5511-201ENSMUST00000189380 802 ntBASIC4.43□□□□□ -1.7
Tnfsf4P43488 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.43□□□□□ -1.7
Tnfsf4P43488 Gm8069-201ENSMUST00000197887 154 ntBASIC4.43□□□□□ -1.7
Tnfsf4P43488 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC4.43□□□□□ -1.7
Tnfsf4P43488 Gm42990-201ENSMUST00000199231 312 ntBASIC4.43□□□□□ -1.7
Tnfsf4P43488 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
Tnfsf4P43488 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Tnfsf4P43488 AC125399.1-201ENSMUST00000224236 595 ntBASIC4.43□□□□□ -1.7
Tnfsf4P43488 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.43□□□□□ -1.7
Tnfsf4P43488 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Tnfsf4P43488 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Tnfsf4P43488 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Tnfsf4P43488 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Tnfsf4P43488 n-R5s168-201ENSMUST00000083948 104 ntBASIC4.43□□□□□ -1.7
Tnfsf4P43488 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Tnfsf4P43488 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Tnfsf4P43488 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Tnfsf4P43488 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Tnfsf4P43488 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
Tnfsf4P43488 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.43□□□□□ -1.7
Tnfsf4P43488 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Tnfsf4P43488 Gm38081-201ENSMUST00000192680 1645 ntBASIC4.43□□□□□ -1.7
Tnfsf4P43488 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Tnfsf4P43488 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
Tnfsf4P43488 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.42□□□□□ -1.7
Tnfsf4P43488 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Tnfsf4P43488 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Tnfsf4P43488 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.42□□□□□ -1.7
Tnfsf4P43488 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Tnfsf4P43488 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
Tnfsf4P43488 Gm24124-201ENSMUST00000104103 132 ntBASIC4.42□□□□□ -1.7
Tnfsf4P43488 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Tnfsf4P43488 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Tnfsf4P43488 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
Tnfsf4P43488 Gm13815-201ENSMUST00000119963 412 ntBASIC4.42□□□□□ -1.7
Tnfsf4P43488 Gm12978-201ENSMUST00000121250 522 ntBASIC4.42□□□□□ -1.7
Tnfsf4P43488 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.42□□□□□ -1.7
Tnfsf4P43488 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Tnfsf4P43488 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.42□□□□□ -1.7
Tnfsf4P43488 Gm26153-201ENSMUST00000157433 127 ntBASIC4.42□□□□□ -1.7
Tnfsf4P43488 Gm16545-201ENSMUST00000161968 463 ntBASIC4.42□□□□□ -1.7
Tnfsf4P43488 Gm17152-201ENSMUST00000172430 535 ntBASIC4.42□□□□□ -1.7
Tnfsf4P43488 Gm5139-201ENSMUST00000175943 249 ntBASIC4.42□□□□□ -1.7
Tnfsf4P43488 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Tnfsf4P43488 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Tnfsf4P43488 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Tnfsf4P43488 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Tnfsf4P43488 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Tnfsf4P43488 Gm5558-201ENSMUST00000178933 495 ntBASIC4.42□□□□□ -1.7
Tnfsf4P43488 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Tnfsf4P43488 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.42□□□□□ -1.7
Tnfsf4P43488 Gm27039-201ENSMUST00000182438 962 ntBASIC4.42□□□□□ -1.7
Tnfsf4P43488 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Tnfsf4P43488 Gm27457-201ENSMUST00000184771 156 ntBASIC4.42□□□□□ -1.7
Tnfsf4P43488 Gm6137-201ENSMUST00000187552 578 ntBASIC4.42□□□□□ -1.7
Tnfsf4P43488 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.42□□□□□ -1.7
Tnfsf4P43488 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.42□□□□□ -1.7
Tnfsf4P43488 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC4.42□□□□□ -1.7
Tnfsf4P43488 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Tnfsf4P43488 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms