Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm24931-201ENSMUST00000158324 107 ntBASIC4.61□□□□□ -1.67
Cdx2P43241 Gm26404-201ENSMUST00000158498 109 ntBASIC4.61□□□□□ -1.67
Cdx2P43241 Gm22326-201ENSMUST00000158897 351 ntBASIC4.61□□□□□ -1.67
Cdx2P43241 Gm15796-201ENSMUST00000162135 204 ntBASIC4.61□□□□□ -1.67
Cdx2P43241 Gm20428-201ENSMUST00000174365 283 ntBASIC4.61□□□□□ -1.67
Cdx2P43241 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Cdx2P43241 Gm19206-201ENSMUST00000186401 827 ntBASIC4.61□□□□□ -1.67
Cdx2P43241 Gm18352-201ENSMUST00000189113 902 ntBASIC4.61□□□□□ -1.67
Cdx2P43241 Gm38360-201ENSMUST00000195130 454 ntBASIC4.61□□□□□ -1.67
Cdx2P43241 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC4.61□□□□□ -1.67
Cdx2P43241 Gm43717-201ENSMUST00000198684 310 ntBASIC4.61□□□□□ -1.67
Cdx2P43241 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Cdx2P43241 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.61□□□□□ -1.67
Cdx2P43241 Gm44852-201ENSMUST00000207950 369 ntBASIC4.61□□□□□ -1.67
Cdx2P43241 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC4.61□□□□□ -1.67
Cdx2P43241 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
Cdx2P43241 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.61□□□□□ -1.67
Cdx2P43241 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Cdx2P43241 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Cdx2P43241 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.61□□□□□ -1.67
Cdx2P43241 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Cdx2P43241 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC4.61□□□□□ -1.67
Cdx2P43241 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Cdx2P43241 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.61□□□□□ -1.67
Cdx2P43241 Gm45149-201ENSMUST00000206459 2172 ntBASIC4.61□□□□□ -1.67
Cdx2P43241 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Cdx2P43241 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Cdx2P43241 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Cdx2P43241 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.61□□□□□ -1.67
Cdx2P43241 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Cdx2P43241 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Cdx2P43241 AC107232.1-201ENSMUST00000227785 1503 ntBASIC4.61□□□□□ -1.67
Cdx2P43241 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC4.6□□□□□ -1.67
Cdx2P43241 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx2P43241 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Cdx2P43241 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx2P43241 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx2P43241 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx2P43241 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx2P43241 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx2P43241 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx2P43241 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx2P43241 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Cdx2P43241 Gm37504-201ENSMUST00000192537 2374 ntBASIC4.6□□□□□ -1.67
Cdx2P43241 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx2P43241 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Cdx2P43241 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx2P43241 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx2P43241 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.6□□□□□ -1.67
Cdx2P43241 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC4.6□□□□□ -1.67
Cdx2P43241 Gm13132-201ENSMUST00000121194 472 ntBASIC4.6□□□□□ -1.67
Cdx2P43241 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx2P43241 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx2P43241 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx2P43241 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx2P43241 Gm16259-201ENSMUST00000145241 553 ntBASIC4.6□□□□□ -1.67
Cdx2P43241 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC4.6□□□□□ -1.67
Cdx2P43241 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC4.6□□□□□ -1.67
Cdx2P43241 Gm21070-201ENSMUST00000182425 985 ntBASIC4.6□□□□□ -1.67
Cdx2P43241 Mir6414-201ENSMUST00000183685 82 ntBASIC4.6□□□□□ -1.67
Cdx2P43241 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC4.6□□□□□ -1.67
Cdx2P43241 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx2P43241 Gm20940-201ENSMUST00000197308 360 ntBASIC4.6□□□□□ -1.67
Cdx2P43241 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx2P43241 Gm42581-201ENSMUST00000201774 966 ntBASIC4.6□□□□□ -1.67
Cdx2P43241 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx2P43241 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC4.6□□□□□ -1.67
Cdx2P43241 AC156832.3-201ENSMUST00000215591 435 ntBASIC4.6□□□□□ -1.67
Cdx2P43241 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.6□□□□□ -1.67
Cdx2P43241 CT573086.3-201ENSMUST00000228762 594 ntBASIC4.6□□□□□ -1.67
Cdx2P43241 n-R5s27-201ENSMUST00000093699 119 ntBASIC4.6□□□□□ -1.67
Cdx2P43241 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Cdx2P43241 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Cdx2P43241 Gm14988-201ENSMUST00000117224 1548 ntBASIC4.6□□□□□ -1.67
Cdx2P43241 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Cdx2P43241 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Cdx2P43241 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Cdx2P43241 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
Cdx2P43241 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Cdx2P43241 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Cdx2P43241 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Cdx2P43241 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.59□□□□□ -1.67
Cdx2P43241 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Cdx2P43241 Gm11971-201ENSMUST00000117715 288 ntBASIC4.59□□□□□ -1.67
Cdx2P43241 Gm14706-201ENSMUST00000117744 255 ntBASIC4.59□□□□□ -1.67
Cdx2P43241 Gm14854-201ENSMUST00000117758 841 ntBASIC4.59□□□□□ -1.67
Cdx2P43241 Gm13438-201ENSMUST00000120100 573 ntBASIC4.59□□□□□ -1.67
Cdx2P43241 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Cdx2P43241 Gm15075-201ENSMUST00000122187 477 ntBASIC4.59□□□□□ -1.67
Cdx2P43241 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC4.59□□□□□ -1.67
Cdx2P43241 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC4.59□□□□□ -1.67
Cdx2P43241 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Cdx2P43241 Gm17101-201ENSMUST00000169520 1588 ntBASIC4.59□□□□□ -1.67
Cdx2P43241 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Cdx2P43241 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC4.59□□□□□ -1.67
Cdx2P43241 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Cdx2P43241 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Cdx2P43241 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Cdx2P43241 Mir3620-201ENSMUST00000184710 61 ntBASIC4.59□□□□□ -1.67
Cdx2P43241 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms