Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Dock9-206ENSMUST00000212181 7368 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HttP42859 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC4.8□□□□□ -1.64
HttP42859 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HttP42859 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HttP42859 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HttP42859 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HttP42859 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HttP42859 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HttP42859 AC159193.1-201ENSMUST00000222872 2517 ntBASIC4.79□□□□□ -1.64
HttP42859 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC4.79□□□□□ -1.64
HttP42859 Gm25177-201ENSMUST00000122634 117 ntBASIC4.79□□□□□ -1.64
HttP42859 Gm6265-201ENSMUST00000149263 231 ntBASIC4.79□□□□□ -1.64
HttP42859 Gm16026-202ENSMUST00000159695 772 ntBASIC4.79□□□□□ -1.64
HttP42859 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HttP42859 Gm44320-201ENSMUST00000199276 86 ntBASIC4.79□□□□□ -1.64
HttP42859 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HttP42859 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC4.79□□□□□ -1.64
HttP42859 Gm46190-201ENSMUST00000219650 427 ntBASIC4.79□□□□□ -1.64
HttP42859 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
HttP42859 Acaca-201ENSMUST00000020843 9026 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HttP42859 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
HttP42859 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HttP42859 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HttP42859 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC4.79□□□□□ -1.64
HttP42859 Gm6558-201ENSMUST00000191934 1973 ntBASIC4.79□□□□□ -1.64
HttP42859 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HttP42859 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.79□□□□□ -1.64
HttP42859 Gm12982-201ENSMUST00000117408 190 ntBASIC4.79□□□□□ -1.64
HttP42859 Gm13118-201ENSMUST00000120402 549 ntBASIC4.79□□□□□ -1.64
HttP42859 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC4.79□□□□□ -1.64
HttP42859 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC4.79□□□□□ -1.64
HttP42859 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HttP42859 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HttP42859 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
HttP42859 Gm37569-201ENSMUST00000192111 1722 ntBASIC4.79□□□□□ -1.64
HttP42859 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC4.79□□□□□ -1.64
HttP42859 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC4.79□□□□□ -1.64
HttP42859 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HttP42859 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HttP42859 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HttP42859 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HttP42859 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HttP42859 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.79□□□□□ -1.64
HttP42859 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HttP42859 Gm18757-201ENSMUST00000207938 3141 ntBASIC4.79□□□□□ -1.64
HttP42859 Gm45343-201ENSMUST00000210452 828 ntBASIC4.79□□□□□ -1.64
HttP42859 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HttP42859 AL772397.1-201ENSMUST00000216707 606 ntBASIC4.79□□□□□ -1.64
HttP42859 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HttP42859 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HttP42859 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HttP42859 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC4.79□□□□□ -1.64
HttP42859 Sdk2-201ENSMUST00000041627 11287 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HttP42859 Gm38070-201ENSMUST00000191850 6480 ntBASIC4.78□□□□□ -1.64
HttP42859 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
HttP42859 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
HttP42859 Anapc1-201ENSMUST00000014499 8942 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HttP42859 AC130661.1-201ENSMUST00000218248 1680 ntBASIC4.78□□□□□ -1.64
HttP42859 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HttP42859 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HttP42859 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
HttP42859 Gm11393-201ENSMUST00000118019 288 ntBASIC4.78□□□□□ -1.64
HttP42859 Gm13550-201ENSMUST00000118185 525 ntBASIC4.78□□□□□ -1.64
HttP42859 Gm27036-201ENSMUST00000182465 980 ntBASIC4.78□□□□□ -1.64
HttP42859 Gm5244-202ENSMUST00000189517 743 ntBASIC4.78□□□□□ -1.64
HttP42859 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.78□□□□□ -1.64
HttP42859 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HttP42859 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HttP42859 Gm23736-201ENSMUST00000082553 75 ntBASIC4.78□□□□□ -1.64
HttP42859 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.78□□□□□ -1.64
HttP42859 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC4.78□□□□□ -1.64
HttP42859 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HttP42859 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC4.78□□□□□ -1.64
HttP42859 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HttP42859 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HttP42859 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.78□□□□□ -1.64
HttP42859 Gm6027-201ENSMUST00000121467 756 ntBASIC4.78□□□□□ -1.64
HttP42859 Gm24363-201ENSMUST00000158440 311 ntBASIC4.78□□□□□ -1.64
HttP42859 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC4.78□□□□□ -1.64
HttP42859 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.78□□□□□ -1.64
HttP42859 Gm37501-201ENSMUST00000192830 691 ntBASIC4.78□□□□□ -1.64
HttP42859 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HttP42859 Gm7443-201ENSMUST00000206355 378 ntBASIC4.78□□□□□ -1.64
HttP42859 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
HttP42859 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HttP42859 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HttP42859 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HttP42859 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
HttP42859 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
HttP42859 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HttP42859 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
HttP42859 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HttP42859 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HttP42859 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HttP42859 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HttP42859 Gm12041-201ENSMUST00000121606 602 ntBASIC4.77□□□□□ -1.65
HttP42859 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
HttP42859 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HttP42859 Gm19201-201ENSMUST00000210127 778 ntBASIC4.77□□□□□ -1.65
HttP42859 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms