Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Mir6903-201ENSMUST00000183597 88 ntBASIC4.34□□□□□ -1.71
P20040 Gm9443-201ENSMUST00000188406 816 ntBASIC4.34□□□□□ -1.71
P20040 Mrgpra14-201ENSMUST00000189782 913 ntBASIC4.34□□□□□ -1.71
P20040 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.34□□□□□ -1.71
P20040 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC4.34□□□□□ -1.71
P20040 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
P20040 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
P20040 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
P20040 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC4.34□□□□□ -1.71
P20040 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC4.34□□□□□ -1.71
P20040 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC4.34□□□□□ -1.71
P20040 AC110816.1-201ENSMUST00000218559 980 ntBASIC4.34□□□□□ -1.71
P20040 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.34□□□□□ -1.71
P20040 Gm6171-201ENSMUST00000220760 645 ntBASIC4.34□□□□□ -1.71
P20040 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC4.34□□□□□ -1.71
P20040 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC4.34□□□□□ -1.71
P20040 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
P20040 Gm26330-201ENSMUST00000082817 104 ntBASIC4.34□□□□□ -1.71
P20040 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC4.34□□□□□ -1.71
P20040 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
P20040 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC4.34□□□□□ -1.71
P20040 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
P20040 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
P20040 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
P20040 AC170999.1-201ENSMUST00000226359 1585 ntBASIC4.34□□□□□ -1.71
P20040 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
P20040 Gm37180-201ENSMUST00000195335 2819 ntBASIC4.34□□□□□ -1.72
P20040 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
P20040 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
P20040 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
P20040 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
P20040 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
P20040 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
P20040 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
P20040 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC4.33□□□□□ -1.72
P20040 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
P20040 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
P20040 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
P20040 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
P20040 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
P20040 Gm17791-201ENSMUST00000185660 1501 ntBASIC4.33□□□□□ -1.72
P20040 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
P20040 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
P20040 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
P20040 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC4.33□□□□□ -1.72
P20040 Gm15388-201ENSMUST00000121578 726 ntBASIC4.33□□□□□ -1.72
P20040 Gm23837-201ENSMUST00000122656 286 ntBASIC4.33□□□□□ -1.72
P20040 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
P20040 Ear-ps9-201ENSMUST00000161963 460 ntBASIC4.33□□□□□ -1.72
P20040 Gm27044-201ENSMUST00000183033 796 ntBASIC4.33□□□□□ -1.72
P20040 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
P20040 Gm2623-201ENSMUST00000199229 286 ntBASIC4.33□□□□□ -1.72
P20040 Gm7721-201ENSMUST00000200446 546 ntBASIC4.33□□□□□ -1.72
P20040 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC4.33□□□□□ -1.72
P20040 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
P20040 Gm45731-201ENSMUST00000211988 1203 ntBASIC4.33□□□□□ -1.72
P20040 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.33□□□□□ -1.72
P20040 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC4.33□□□□□ -1.72
P20040 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC4.33□□□□□ -1.72
P20040 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC4.33□□□□□ -1.72
P20040 AC125484.1-201ENSMUST00000223218 234 ntBASIC4.33□□□□□ -1.72
P20040 Gm2645-201ENSMUST00000223516 547 ntBASIC4.33□□□□□ -1.72
P20040 AC131178.1-201ENSMUST00000228649 492 ntBASIC4.33□□□□□ -1.72
P20040 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
P20040 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
P20040 Gm6195-201ENSMUST00000063059 357 ntBASIC4.33□□□□□ -1.72
P20040 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
P20040 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
P20040 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
P20040 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
P20040 n-R5s27-201ENSMUST00000093699 119 ntBASIC4.33□□□□□ -1.72
P20040 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
P20040 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
P20040 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
P20040 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
P20040 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
P20040 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.32□□□□□ -1.72
P20040 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
P20040 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.32□□□□□ -1.72
P20040 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
P20040 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC4.32□□□□□ -1.72
P20040 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
P20040 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
P20040 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
P20040 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.32□□□□□ -1.72
P20040 Gm13491-201ENSMUST00000118267 235 ntBASIC4.32□□□□□ -1.72
P20040 Gm14725-201ENSMUST00000120324 828 ntBASIC4.32□□□□□ -1.72
P20040 Gm16463-201ENSMUST00000120527 721 ntBASIC4.32□□□□□ -1.72
P20040 Gm13452-201ENSMUST00000120896 1097 ntBASIC4.32□□□□□ -1.72
P20040 Gm12007-201ENSMUST00000120978 597 ntBASIC4.32□□□□□ -1.72
P20040 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC4.32□□□□□ -1.72
P20040 Gm6632-201ENSMUST00000168425 954 ntBASIC4.32□□□□□ -1.72
P20040 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC4.32□□□□□ -1.72
P20040 Mir7006-201ENSMUST00000183624 69 ntBASIC4.32□□□□□ -1.72
P20040 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
P20040 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
P20040 Gm28877-201ENSMUST00000191349 604 ntBASIC4.32□□□□□ -1.72
P20040 Gm37631-201ENSMUST00000192275 364 ntBASIC4.32□□□□□ -1.72
P20040 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC4.32□□□□□ -1.72
P20040 Gm2147-201ENSMUST00000193588 639 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms