Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm14359-201ENSMUST00000118883 424 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm2005-201ENSMUST00000120759 542 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm12920-201ENSMUST00000121818 1186 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm12833-201ENSMUST00000136112 477 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm26025-201ENSMUST00000158655 271 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Hoxd3P09027 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm22701-201ENSMUST00000175371 291 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm20698-201ENSMUST00000175657 233 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm14527-201ENSMUST00000179300 639 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm43555-201ENSMUST00000196588 310 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm18430-201ENSMUST00000197534 682 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm3511-201ENSMUST00000199823 204 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm43235-201ENSMUST00000200121 297 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm2221-201ENSMUST00000209342 418 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm6850-201ENSMUST00000210031 530 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm17989-201ENSMUST00000211543 412 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC5.45□□□□□ -1.54
Hoxd3P09027 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC5.45□□□□□ -1.54
Hoxd3P09027 AC154552.1-201ENSMUST00000222969 202 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 AC164294.1-201ENSMUST00000224682 688 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm23447-201ENSMUST00000082798 163 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Hoxd3P09027 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Hoxd3P09027 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm6866-201ENSMUST00000188559 2549 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Hoxd3P09027 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Hoxd3P09027 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
Hoxd3P09027 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm44697-201ENSMUST00000207756 1679 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 AC164107.1-202ENSMUST00000228953 1816 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Hoxd3P09027 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm43581-201ENSMUST00000196766 2864 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 Mir697-201ENSMUST00000102316 109 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Hoxd3P09027 Mir208b-201ENSMUST00000104735 77 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Hoxd3P09027 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.44□□□□□ -1.54
Hoxd3P09027 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm15129-201ENSMUST00000119673 279 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm15335-201ENSMUST00000122442 411 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm23538-201ENSMUST00000157535 101 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 Mir1929-201ENSMUST00000158635 93 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm25348-201ENSMUST00000158961 111 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm20415-201ENSMUST00000172877 423 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm21959-201ENSMUST00000178439 452 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 Mir7212-201ENSMUST00000184098 61 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm27178-201ENSMUST00000184962 340 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm28847-201ENSMUST00000186778 700 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm18698-201ENSMUST00000192327 668 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm37336-202ENSMUST00000193705 468 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.44□□□□□ -1.54
Hoxd3P09027 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm45173-201ENSMUST00000206819 305 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 Gm2767-201ENSMUST00000209582 473 ntBASIC5.44□□□□□ -1.54
Hoxd3P09027 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms