Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm43130-201ENSMUST00000197721 3907 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm42927-201ENSMUST00000200624 3841 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Hmgb3O54879 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Hmgb3O54879 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Hmgb3O54879 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm44542-201ENSMUST00000208677 4314 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Hmgb3O54879 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm5746-201ENSMUST00000183550 2200 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC3.81□□□□□ -1.8
Hmgb3O54879 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm16205-201ENSMUST00000117720 1027 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm5381-201ENSMUST00000117975 1250 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm14861-201ENSMUST00000119451 455 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm8757-201ENSMUST00000119660 372 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Mup-ps19-201ENSMUST00000120390 519 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Hmgb3O54879 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm26347-201ENSMUST00000157526 131 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm23496-201ENSMUST00000157741 248 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm16318-201ENSMUST00000162402 601 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm5258-201ENSMUST00000165437 327 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm20657-201ENSMUST00000177079 515 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm27460-201ENSMUST00000184213 100 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm27210-201ENSMUST00000184263 402 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm29610-201ENSMUST00000187749 453 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm28974-201ENSMUST00000187893 231 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm37203-201ENSMUST00000191618 385 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm37421-201ENSMUST00000193088 132 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm10292-202ENSMUST00000193165 585 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm37355-201ENSMUST00000193345 606 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC3.81□□□□□ -1.8
Hmgb3O54879 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm43825-201ENSMUST00000199650 734 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Hmgb3O54879 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm44559-201ENSMUST00000207177 1012 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Hmgb3O54879 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm18510-201ENSMUST00000219335 1096 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Hmgb3O54879 AC165283.1-201ENSMUST00000223390 307 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 AC121137.1-201ENSMUST00000225272 602 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Gm5045-201ENSMUST00000027054 810 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Hmgb3O54879 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Hmgb3O54879 Snora52-201ENSMUST00000082732 137 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Mir331-201ENSMUST00000083673 96 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Hmgb3O54879 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Hmgb3O54879 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Hmgb3O54879 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Hmgb3O54879 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Hmgb3O54879 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC3.81□□□□□ -1.8
Hmgb3O54879 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Hmgb3O54879 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Hmgb3O54879 Gm22231-201ENSMUST00000101027 73 ntBASIC3.8□□□□□ -1.8
Hmgb3O54879 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Hmgb3O54879 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hmgb3O54879 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Hmgb3O54879 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Hmgb3O54879 Gm11912-201ENSMUST00000117235 264 ntBASIC3.8□□□□□ -1.8
Hmgb3O54879 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC3.8□□□□□ -1.8
Hmgb3O54879 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hmgb3O54879 Gm15745-201ENSMUST00000119807 115 ntBASIC3.8□□□□□ -1.8
Hmgb3O54879 Gm9085-201ENSMUST00000119994 1072 ntBASIC3.8□□□□□ -1.8
Hmgb3O54879 Gm12074-201ENSMUST00000120189 219 ntBASIC3.8□□□□□ -1.8
Hmgb3O54879 Mir1900-201ENSMUST00000122714 78 ntBASIC3.8□□□□□ -1.8
Hmgb3O54879 Gm23171-201ENSMUST00000157159 264 ntBASIC3.8□□□□□ -1.8
Hmgb3O54879 Gm26354-201ENSMUST00000158221 129 ntBASIC3.8□□□□□ -1.8
Hmgb3O54879 Gm17046-201ENSMUST00000168078 850 ntBASIC3.8□□□□□ -1.8
Hmgb3O54879 Gm25037-201ENSMUST00000175418 110 ntBASIC3.8□□□□□ -1.8
Hmgb3O54879 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hmgb3O54879 Gm8321-201ENSMUST00000181691 980 ntBASIC3.8□□□□□ -1.8
Hmgb3O54879 Mir6416-201ENSMUST00000183664 117 ntBASIC3.8□□□□□ -1.8
Hmgb3O54879 Mir7058-201ENSMUST00000184637 75 ntBASIC3.8□□□□□ -1.8
Hmgb3O54879 Mir6400-201ENSMUST00000184870 92 ntBASIC3.8□□□□□ -1.8
Hmgb3O54879 Gm28996-201ENSMUST00000190316 721 ntBASIC3.8□□□□□ -1.8
Hmgb3O54879 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC3.8□□□□□ -1.8
Hmgb3O54879 Gm37243-201ENSMUST00000193407 595 ntBASIC3.8□□□□□ -1.8
Hmgb3O54879 Trbv11-201ENSMUST00000194354 260 ntBASIC3.8□□□□□ -1.8
Hmgb3O54879 Gm34149-201ENSMUST00000203547 304 ntBASIC3.8□□□□□ -1.8
Hmgb3O54879 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC3.8□□□□□ -1.8
Hmgb3O54879 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Hmgb3O54879 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC3.8□□□□□ -1.8
Hmgb3O54879 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Hmgb3O54879 AC166358.9-201ENSMUST00000220653 375 ntBASIC3.8□□□□□ -1.8
Hmgb3O54879 AC154450.1-201ENSMUST00000220911 485 ntBASIC3.8□□□□□ -1.8
Hmgb3O54879 AC159231.1-201ENSMUST00000225365 226 ntBASIC3.8□□□□□ -1.8
Hmgb3O54879 AC154616.2-201ENSMUST00000227978 398 ntBASIC3.8□□□□□ -1.8
Hmgb3O54879 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Hmgb3O54879 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Hmgb3O54879 Gm22684-201ENSMUST00000082849 132 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms