Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm9496-201ENSMUST00000191295 1601 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm9311-201ENSMUST00000118042 1269 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm12565-201ENSMUST00000119004 649 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm13493-201ENSMUST00000120318 493 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm12880-201ENSMUST00000120652 494 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Defa-ps12-201ENSMUST00000122353 193 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm4202-201ENSMUST00000169025 733 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm5430-201ENSMUST00000182525 915 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm27428-201ENSMUST00000184289 110 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Vmn1r82-202ENSMUST00000191002 918 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm21715-201ENSMUST00000191056 694 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm38122-201ENSMUST00000192679 885 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm20128-201ENSMUST00000196189 417 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Olfr1309-201ENSMUST00000207885 964 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm6702-201ENSMUST00000208496 471 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm5176-202ENSMUST00000220267 583 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 AC131720.2-201ENSMUST00000220420 431 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 AC154795.1-201ENSMUST00000225611 364 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 AC123533.2-201ENSMUST00000228176 375 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm8412-201ENSMUST00000077493 440 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm43990-201ENSMUST00000203790 1691 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm36962-201ENSMUST00000192114 1761 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC5.42□□□□□ -1.54
Pcdh1F7BJK1 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm23979-201ENSMUST00000104071 128 ntBASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Zfp389-201ENSMUST00000118425 675 ntBASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm11624-201ENSMUST00000118579 1041 ntBASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm14769-201ENSMUST00000118590 432 ntBASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm12099-201ENSMUST00000118660 750 ntBASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm11606-201ENSMUST00000120706 617 ntBASIC5.41□□□□□ -1.54
Pcdh1F7BJK1 Gm15696-201ENSMUST00000121730 445 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms