Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
Scn1aA2APX8 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Scn1aA2APX8 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC4.86□□□□□ -1.63
Scn1aA2APX8 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.86□□□□□ -1.63
Scn1aA2APX8 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Scn1aA2APX8 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.86□□□□□ -1.63
Scn1aA2APX8 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Scn1aA2APX8 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Scn1aA2APX8 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.86□□□□□ -1.63
Scn1aA2APX8 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Scn1aA2APX8 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Scn1aA2APX8 Gm12852-201ENSMUST00000119478 719 ntBASIC4.85□□□□□ -1.63
Scn1aA2APX8 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Scn1aA2APX8 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC4.85□□□□□ -1.63
Scn1aA2APX8 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.85□□□□□ -1.63
Scn1aA2APX8 Gm23465-201ENSMUST00000157134 262 ntBASIC4.85□□□□□ -1.63
Scn1aA2APX8 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC4.85□□□□□ -1.63
Scn1aA2APX8 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Scn1aA2APX8 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.85□□□□□ -1.63
Scn1aA2APX8 Gm5734-201ENSMUST00000189787 913 ntBASIC4.85□□□□□ -1.63
Scn1aA2APX8 Gm37670-201ENSMUST00000193622 229 ntBASIC4.85□□□□□ -1.63
Scn1aA2APX8 Gm44054-201ENSMUST00000203814 372 ntBASIC4.85□□□□□ -1.63
Scn1aA2APX8 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.85□□□□□ -1.63
Scn1aA2APX8 AC129935.1-201ENSMUST00000226302 873 ntBASIC4.85□□□□□ -1.63
Scn1aA2APX8 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Scn1aA2APX8 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Scn1aA2APX8 Vaultrc5-201ENSMUST00000083211 143 ntBASIC4.85□□□□□ -1.63
Scn1aA2APX8 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Scn1aA2APX8 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.85□□□□□ -1.63
Scn1aA2APX8 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Scn1aA2APX8 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Scn1aA2APX8 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Scn1aA2APX8 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Scn1aA2APX8 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Scn1aA2APX8 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Scn1aA2APX8 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Scn1aA2APX8 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Scn1aA2APX8 Gm4759-201ENSMUST00000183414 6622 ntBASIC4.85□□□□□ -1.63
Scn1aA2APX8 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Scn1aA2APX8 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
Scn1aA2APX8 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC4.85□□□□□ -1.63
Scn1aA2APX8 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC4.85□□□□□ -1.63
Scn1aA2APX8 Gm27564-201ENSMUST00000185196 96 ntBASIC4.85□□□□□ -1.63
Scn1aA2APX8 Gm28304-201ENSMUST00000185977 312 ntBASIC4.85□□□□□ -1.63
Scn1aA2APX8 Gm29256-201ENSMUST00000189094 312 ntBASIC4.85□□□□□ -1.63
Scn1aA2APX8 Gm28484-201ENSMUST00000190606 312 ntBASIC4.85□□□□□ -1.63
Scn1aA2APX8 Gm37682-201ENSMUST00000191776 522 ntBASIC4.85□□□□□ -1.63
Scn1aA2APX8 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC4.85□□□□□ -1.63
Scn1aA2APX8 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.85□□□□□ -1.63
Scn1aA2APX8 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Scn1aA2APX8 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Scn1aA2APX8 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Scn1aA2APX8 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC4.85□□□□□ -1.63
Scn1aA2APX8 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Scn1aA2APX8 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC4.85□□□□□ -1.63
Scn1aA2APX8 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.85□□□□□ -1.63
Scn1aA2APX8 Gm43426-201ENSMUST00000197287 2597 ntBASIC4.84□□□□□ -1.63
Scn1aA2APX8 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Scn1aA2APX8 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Scn1aA2APX8 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Scn1aA2APX8 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Scn1aA2APX8 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Scn1aA2APX8 Gm22498-201ENSMUST00000104497 86 ntBASIC4.84□□□□□ -1.63
Scn1aA2APX8 Gm24369-201ENSMUST00000175387 96 ntBASIC4.84□□□□□ -1.63
Scn1aA2APX8 Gm43828-201ENSMUST00000196890 639 ntBASIC4.84□□□□□ -1.63
Scn1aA2APX8 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.84□□□□□ -1.63
Scn1aA2APX8 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.84□□□□□ -1.63
Scn1aA2APX8 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC4.84□□□□□ -1.63
Scn1aA2APX8 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4.84□□□□□ -1.63
Scn1aA2APX8 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.84□□□□□ -1.63
Scn1aA2APX8 AC154239.2-201ENSMUST00000227859 233 ntBASIC4.84□□□□□ -1.63
Scn1aA2APX8 AC133283.1-201ENSMUST00000228443 859 ntBASIC4.84□□□□□ -1.63
Scn1aA2APX8 CT573086.3-201ENSMUST00000228762 594 ntBASIC4.84□□□□□ -1.63
Scn1aA2APX8 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Scn1aA2APX8 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Scn1aA2APX8 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.84□□□□□ -1.63
Scn1aA2APX8 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Scn1aA2APX8 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Scn1aA2APX8 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
Scn1aA2APX8 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Scn1aA2APX8 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC4.84□□□□□ -1.63
Scn1aA2APX8 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.84□□□□□ -1.63
Scn1aA2APX8 Gm7451-201ENSMUST00000208382 1392 ntBASIC4.84□□□□□ -1.63
Scn1aA2APX8 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Scn1aA2APX8 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Scn1aA2APX8 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
Scn1aA2APX8 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
Scn1aA2APX8 Gm44530-201ENSMUST00000207920 3559 ntBASIC4.84□□□□□ -1.64
Scn1aA2APX8 Gm37902-201ENSMUST00000192839 1683 ntBASIC4.84□□□□□ -1.64
Scn1aA2APX8 Gm14628-201ENSMUST00000117508 635 ntBASIC4.84□□□□□ -1.64
Scn1aA2APX8 Gm14933-201ENSMUST00000118840 481 ntBASIC4.84□□□□□ -1.64
Scn1aA2APX8 Gm14369-201ENSMUST00000121355 285 ntBASIC4.84□□□□□ -1.64
Scn1aA2APX8 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC4.84□□□□□ -1.64
Scn1aA2APX8 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC4.84□□□□□ -1.64
Scn1aA2APX8 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC4.84□□□□□ -1.64
Scn1aA2APX8 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC4.84□□□□□ -1.64
Scn1aA2APX8 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC4.84□□□□□ -1.64
Scn1aA2APX8 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.84□□□□□ -1.64
Scn1aA2APX8 Gm5252-201ENSMUST00000189030 909 ntBASIC4.84□□□□□ -1.64
Scn1aA2APX8 Gm28116-201ENSMUST00000189064 387 ntBASIC4.84□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms