Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm25647-201ENSMUST00000101832 78 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm25823-201ENSMUST00000101995 78 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm24235-201ENSMUST00000104319 129 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm11912-201ENSMUST00000117235 264 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm15185-201ENSMUST00000117397 746 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm7657-201ENSMUST00000118851 666 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm12448-201ENSMUST00000118852 655 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm13430-201ENSMUST00000121366 288 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm11350-201ENSMUST00000121436 870 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm14589-201ENSMUST00000121640 727 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm5699-201ENSMUST00000152491 723 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm25389-201ENSMUST00000157340 286 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm24220-201ENSMUST00000177753 79 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm25988-201ENSMUST00000177759 79 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm23471-201ENSMUST00000177886 79 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm26488-201ENSMUST00000178225 79 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm23449-201ENSMUST00000179208 79 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm25221-201ENSMUST00000180051 79 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm28061-201ENSMUST00000189085 807 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm36985-201ENSMUST00000195595 379 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm42454-201ENSMUST00000196805 1181 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm44330-201ENSMUST00000200106 143 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm8719-201ENSMUST00000203602 534 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm44776-201ENSMUST00000207212 381 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm18039-201ENSMUST00000217816 728 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.29□□□□□ -1.56
Vps28Q9D1C8 AV026068-237ENSMUST00000226075 572 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm24763-201ENSMUST00000083688 190 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Vps28Q9D1C8 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm43843-201ENSMUST00000202396 1587 ntBASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Vps28Q9D1C8 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Gm15161-201ENSMUST00000117340 387 ntBASIC5.28□□□□□ -1.56
Vps28Q9D1C8 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Vps28Q9D1C8 H3f3c-201ENSMUST00000119459 411 ntBASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Gm13435-201ENSMUST00000120111 1023 ntBASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Gm23993-201ENSMUST00000157478 144 ntBASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Gm22725-201ENSMUST00000158092 110 ntBASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Gm25865-201ENSMUST00000158247 104 ntBASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Gm27543-201ENSMUST00000183562 177 ntBASIC5.28□□□□□ -1.56
Vps28Q9D1C8 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Gm43315-201ENSMUST00000198120 313 ntBASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Gm4321-201ENSMUST00000200520 442 ntBASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Gm44817-201ENSMUST00000205416 453 ntBASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Vps28Q9D1C8 AC122301.1-201ENSMUST00000219625 507 ntBASIC5.28□□□□□ -1.56
Vps28Q9D1C8 AC159263.3-201ENSMUST00000223434 460 ntBASIC5.28□□□□□ -1.56
Vps28Q9D1C8 AC153153.2-201ENSMUST00000223572 411 ntBASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Gm10780-201ENSMUST00000099459 285 ntBASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Vps28Q9D1C8 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.27□□□□□ -1.57
Vps28Q9D1C8 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Vps28Q9D1C8 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
Vps28Q9D1C8 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms