Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Mir879-201ENSMUST00000104703 76 ntBASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Gm6461-201ENSMUST00000120015 633 ntBASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Gm16254-201ENSMUST00000131528 730 ntBASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Gm23354-201ENSMUST00000158426 104 ntBASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Gm24175-201ENSMUST00000158931 129 ntBASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Gm18717-201ENSMUST00000192744 1241 ntBASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Gm18529-201ENSMUST00000193025 1257 ntBASIC5.59□□□□□ -1.51
Smc1aQ9CU62 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Gm9038-201ENSMUST00000203400 604 ntBASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Gm20946-201ENSMUST00000212367 461 ntBASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Gm19936-201ENSMUST00000216414 838 ntBASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 AC154657.1-201ENSMUST00000226394 775 ntBASIC5.59□□□□□ -1.51
Smc1aQ9CU62 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 n-R5s13-201ENSMUST00000093707 119 ntBASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Smc1aQ9CU62 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.59□□□□□ -1.52
Smc1aQ9CU62 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Smc1aQ9CU62 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Smc1aQ9CU62 AC127371.2-201ENSMUST00000228108 1933 ntBASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Smc1aQ9CU62 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Gm37010-201ENSMUST00000194539 1704 ntBASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Gm24117-201ENSMUST00000103973 133 ntBASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Gm8129-201ENSMUST00000118230 213 ntBASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Gm15120-201ENSMUST00000120602 301 ntBASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Gm17014-201ENSMUST00000120765 168 ntBASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Gm22870-201ENSMUST00000157501 112 ntBASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Gm23700-201ENSMUST00000158842 102 ntBASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Gm19206-201ENSMUST00000186401 827 ntBASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Gm17999-201ENSMUST00000211568 542 ntBASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Olfr151-202ENSMUST00000221099 929 ntBASIC5.58□□□□□ -1.52
Smc1aQ9CU62 AC132260.2-201ENSMUST00000224482 344 ntBASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Prl7a1-203ENSMUST00000224852 1283 ntBASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Smc1aQ9CU62 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Gm43826-201ENSMUST00000199604 2612 ntBASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Gm7529-201ENSMUST00000213753 1897 ntBASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Smc1aQ9CU62 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Smc1aQ9CU62 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Gm36931-201ENSMUST00000192997 4801 ntBASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Gm23948-201ENSMUST00000104030 132 ntBASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Gm25655-201ENSMUST00000158465 290 ntBASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Smc1aQ9CU62 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Smc1aQ9CU62 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms