Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Usp47Q8BY87 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Usp47Q8BY87 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Usp47Q8BY87 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC6.62□□□□□ -1.35
Usp47Q8BY87 Gm38307-201ENSMUST00000195630 1840 ntBASIC6.62□□□□□ -1.35
Usp47Q8BY87 Gm21461-201ENSMUST00000200382 863 ntBASIC6.62□□□□□ -1.35
Usp47Q8BY87 Gm43036-201ENSMUST00000200594 373 ntBASIC6.62□□□□□ -1.35
Usp47Q8BY87 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC6.62□□□□□ -1.35
Usp47Q8BY87 Gm9560-201ENSMUST00000205012 1201 ntBASIC6.62□□□□□ -1.35
Usp47Q8BY87 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Usp47Q8BY87 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC6.62□□□□□ -1.35
Usp47Q8BY87 Gm45651-201ENSMUST00000210857 335 ntBASIC6.62□□□□□ -1.35
Usp47Q8BY87 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Usp47Q8BY87 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC6.62□□□□□ -1.35
Usp47Q8BY87 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Usp47Q8BY87 Gm8942-201ENSMUST00000217892 400 ntBASIC6.62□□□□□ -1.35
Usp47Q8BY87 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Usp47Q8BY87 Gm6988-201ENSMUST00000222676 375 ntBASIC6.62□□□□□ -1.35
Usp47Q8BY87 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
Usp47Q8BY87 AC129935.1-201ENSMUST00000226302 873 ntBASIC6.62□□□□□ -1.35
Usp47Q8BY87 AC127371.2-201ENSMUST00000228108 1933 ntBASIC6.62□□□□□ -1.35
Usp47Q8BY87 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC6.62□□□□□ -1.35
Usp47Q8BY87 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Usp47Q8BY87 Gm7808-201ENSMUST00000082002 387 ntBASIC6.62□□□□□ -1.35
Usp47Q8BY87 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC6.62□□□□□ -1.35
Usp47Q8BY87 Gm38263-201ENSMUST00000195879 3059 ntBASIC6.62□□□□□ -1.35
Usp47Q8BY87 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Usp47Q8BY87 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Usp47Q8BY87 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Usp47Q8BY87 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Usp47Q8BY87 AC122317.3-201ENSMUST00000219320 3524 ntBASIC6.61□□□□□ -1.35
Usp47Q8BY87 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Usp47Q8BY87 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
Usp47Q8BY87 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.61□□□□□ -1.35
Usp47Q8BY87 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Usp47Q8BY87 Gm13787-201ENSMUST00000120422 168 ntBASIC6.61□□□□□ -1.35
Usp47Q8BY87 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Usp47Q8BY87 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC6.61□□□□□ -1.35
Usp47Q8BY87 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Usp47Q8BY87 Gm23023-201ENSMUST00000158767 109 ntBASIC6.61□□□□□ -1.35
Usp47Q8BY87 Gm3091-201ENSMUST00000163408 484 ntBASIC6.61□□□□□ -1.35
Usp47Q8BY87 Gm18128-201ENSMUST00000172625 511 ntBASIC6.61□□□□□ -1.35
Usp47Q8BY87 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC6.61□□□□□ -1.35
Usp47Q8BY87 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC6.61□□□□□ -1.35
Usp47Q8BY87 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC6.61□□□□□ -1.35
Usp47Q8BY87 AC163631.1-201ENSMUST00000225041 598 ntBASIC6.61□□□□□ -1.35
Usp47Q8BY87 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Usp47Q8BY87 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Usp47Q8BY87 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Usp47Q8BY87 Zscan4a-201ENSMUST00000210573 2279 ntBASIC6.61□□□□□ -1.35
Usp47Q8BY87 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Usp47Q8BY87 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Usp47Q8BY87 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC6.61□□□□□ -1.35
Usp47Q8BY87 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Usp47Q8BY87 Gm43528-201ENSMUST00000199492 1674 ntBASIC6.61□□□□□ -1.35
Usp47Q8BY87 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Usp47Q8BY87 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Usp47Q8BY87 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Usp47Q8BY87 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC6.6□□□□□ -1.35
Usp47Q8BY87 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
Usp47Q8BY87 Gm23465-201ENSMUST00000157134 262 ntBASIC6.6□□□□□ -1.35
Usp47Q8BY87 Gm23501-201ENSMUST00000157744 256 ntBASIC6.6□□□□□ -1.35
Usp47Q8BY87 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC6.6□□□□□ -1.35
Usp47Q8BY87 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC6.6□□□□□ -1.35
Usp47Q8BY87 Gm37670-201ENSMUST00000193622 229 ntBASIC6.6□□□□□ -1.35
Usp47Q8BY87 Gm29793-201ENSMUST00000202874 460 ntBASIC6.6□□□□□ -1.35
Usp47Q8BY87 AC122188.1-201ENSMUST00000217534 312 ntBASIC6.6□□□□□ -1.35
Usp47Q8BY87 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Usp47Q8BY87 Gm25818-201ENSMUST00000083282 164 ntBASIC6.6□□□□□ -1.35
Usp47Q8BY87 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Usp47Q8BY87 Gm37780-201ENSMUST00000194117 1873 ntBASIC6.6□□□□□ -1.35
Usp47Q8BY87 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Usp47Q8BY87 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Usp47Q8BY87 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Usp47Q8BY87 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
Usp47Q8BY87 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Usp47Q8BY87 Gm13477-201ENSMUST00000121620 2687 ntBASIC6.59□□□□□ -1.35
Usp47Q8BY87 Gm42559-201ENSMUST00000201811 3532 ntBASIC6.59□□□□□ -1.35
Usp47Q8BY87 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Usp47Q8BY87 Gm22498-201ENSMUST00000104497 86 ntBASIC6.59□□□□□ -1.35
Usp47Q8BY87 Gm11914-201ENSMUST00000117094 507 ntBASIC6.59□□□□□ -1.35
Usp47Q8BY87 Gm12807-201ENSMUST00000121546 962 ntBASIC6.59□□□□□ -1.35
Usp47Q8BY87 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC6.59□□□□□ -1.35
Usp47Q8BY87 Gm27883-201ENSMUST00000183941 102 ntBASIC6.59□□□□□ -1.35
Usp47Q8BY87 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC6.59□□□□□ -1.35
Usp47Q8BY87 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC6.59□□□□□ -1.35
Usp47Q8BY87 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC6.59□□□□□ -1.35
Usp47Q8BY87 Nsa2-203ENSMUST00000225410 974 ntBASIC6.59□□□□□ -1.35
Usp47Q8BY87 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC6.59□□□□□ -1.35
Usp47Q8BY87 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Usp47Q8BY87 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Usp47Q8BY87 Gm45644-201ENSMUST00000210255 2740 ntBASIC6.59□□□□□ -1.35
Usp47Q8BY87 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Usp47Q8BY87 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Usp47Q8BY87 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Usp47Q8BY87 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Usp47Q8BY87 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Usp47Q8BY87 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Usp47Q8BY87 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Usp47Q8BY87 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms