Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm18461-201ENSMUST00000208421 420 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Gm21041-201ENSMUST00000214829 823 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Mir133b-201ENSMUST00000083546 119 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Gm25682-201ENSMUST00000083942 164 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Gm42535-201ENSMUST00000197312 1399 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Gm8674-201ENSMUST00000179367 3047 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Gm7709-201ENSMUST00000199391 1858 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Gm42455-201ENSMUST00000199761 2736 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Gm14711-201ENSMUST00000117056 217 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Gm8595-201ENSMUST00000118250 630 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 H3f3c-201ENSMUST00000119459 411 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Gm15388-201ENSMUST00000121578 726 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Gm5699-201ENSMUST00000152491 723 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Gm25342-201ENSMUST00000157459 122 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Gm23965-201ENSMUST00000157969 142 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Gm24860-201ENSMUST00000158457 276 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Mir1963-201ENSMUST00000158594 59 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Gm6632-201ENSMUST00000168425 954 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Gm17060-201ENSMUST00000172394 824 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Mir6398-201ENSMUST00000184541 102 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Gm19231-201ENSMUST00000193212 830 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Gm38011-201ENSMUST00000193312 279 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Gm44403-201ENSMUST00000198554 129 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Gm44683-201ENSMUST00000209088 484 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 AC153153.2-201ENSMUST00000223572 411 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 AC163646.1-201ENSMUST00000227704 397 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Gm23407-201ENSMUST00000082538 91 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Gm23330-201ENSMUST00000082660 164 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Mir504-201ENSMUST00000093602 79 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 AC108802.1-201ENSMUST00000219501 3142 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Gm43209-201ENSMUST00000198949 1588 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Ccdc40Q8BI79 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm24170-201ENSMUST00000104124 133 ntBASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm23746-201ENSMUST00000104229 125 ntBASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm11486-201ENSMUST00000107322 478 ntBASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm15225-201ENSMUST00000120449 1017 ntBASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm11805-201ENSMUST00000121238 600 ntBASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm24065-201ENSMUST00000157487 264 ntBASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm25865-201ENSMUST00000158247 104 ntBASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm17142-201ENSMUST00000164933 645 ntBASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Mir6418-201ENSMUST00000185075 115 ntBASIC5.23□□□□□ -1.57
Ccdc40Q8BI79 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 123.1 ms