Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Gm43845-201ENSMUST00000202462 1820 ntBASIC5.04□□□□□ -1.6
Trim62Q80V85 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim62Q80V85 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim62Q80V85 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.04□□□□□ -1.6
Trim62Q80V85 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Trim62Q80V85 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
Trim62Q80V85 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim62Q80V85 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim62Q80V85 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trim62Q80V85 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim62Q80V85 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC5.04□□□□□ -1.6
Trim62Q80V85 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Trim62Q80V85 Gm15185-201ENSMUST00000117397 746 ntBASIC5.04□□□□□ -1.6
Trim62Q80V85 Gm15766-201ENSMUST00000118025 813 ntBASIC5.04□□□□□ -1.6
Trim62Q80V85 Gm12704-201ENSMUST00000119789 464 ntBASIC5.04□□□□□ -1.6
Trim62Q80V85 Gm13007-201ENSMUST00000121866 365 ntBASIC5.04□□□□□ -1.6
Trim62Q80V85 Gm24628-201ENSMUST00000122761 289 ntBASIC5.04□□□□□ -1.6
Trim62Q80V85 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.04□□□□□ -1.6
Trim62Q80V85 Gm26098-201ENSMUST00000157247 288 ntBASIC5.04□□□□□ -1.6
Trim62Q80V85 Gm26310-201ENSMUST00000157766 117 ntBASIC5.04□□□□□ -1.6
Trim62Q80V85 Gm23082-201ENSMUST00000157852 133 ntBASIC5.04□□□□□ -1.6
Trim62Q80V85 Gm23546-201ENSMUST00000158211 137 ntBASIC5.04□□□□□ -1.6
Trim62Q80V85 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC5.04□□□□□ -1.6
Trim62Q80V85 Gm4134-201ENSMUST00000173244 563 ntBASIC5.04□□□□□ -1.6
Trim62Q80V85 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC5.04□□□□□ -1.6
Trim62Q80V85 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC5.04□□□□□ -1.6
Trim62Q80V85 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim62Q80V85 Gm28976-201ENSMUST00000188070 144 ntBASIC5.04□□□□□ -1.6
Trim62Q80V85 Gm18850-201ENSMUST00000211578 388 ntBASIC5.04□□□□□ -1.6
Trim62Q80V85 Gm29785-201ENSMUST00000217033 383 ntBASIC5.04□□□□□ -1.6
Trim62Q80V85 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.04□□□□□ -1.6
Trim62Q80V85 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim62Q80V85 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Trim62Q80V85 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trim62Q80V85 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.04□□□□□ -1.6
Trim62Q80V85 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim62Q80V85 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim62Q80V85 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Trim62Q80V85 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.03□□□□□ -1.6
Trim62Q80V85 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim62Q80V85 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Trim62Q80V85 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Trim62Q80V85 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Trim62Q80V85 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
Trim62Q80V85 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC5.03□□□□□ -1.6
Trim62Q80V85 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim62Q80V85 Gm24160-201ENSMUST00000104594 126 ntBASIC5.03□□□□□ -1.6
Trim62Q80V85 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC5.03□□□□□ -1.6
Trim62Q80V85 Gm13132-201ENSMUST00000121194 472 ntBASIC5.03□□□□□ -1.6
Trim62Q80V85 Gm13149-201ENSMUST00000122071 339 ntBASIC5.03□□□□□ -1.6
Trim62Q80V85 Gm25290-201ENSMUST00000122796 144 ntBASIC5.03□□□□□ -1.6
Trim62Q80V85 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC5.03□□□□□ -1.6
Trim62Q80V85 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Trim62Q80V85 Mir7222-201ENSMUST00000183740 75 ntBASIC5.03□□□□□ -1.6
Trim62Q80V85 Gm43717-201ENSMUST00000198684 310 ntBASIC5.03□□□□□ -1.6
Trim62Q80V85 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC5.03□□□□□ -1.6
Trim62Q80V85 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC5.03□□□□□ -1.6
Trim62Q80V85 Gm44261-201ENSMUST00000203337 209 ntBASIC5.03□□□□□ -1.6
Trim62Q80V85 Gm44607-201ENSMUST00000205611 1090 ntBASIC5.03□□□□□ -1.6
Trim62Q80V85 Gm22220-201ENSMUST00000082671 149 ntBASIC5.03□□□□□ -1.6
Trim62Q80V85 Gm24166-201ENSMUST00000082724 135 ntBASIC5.03□□□□□ -1.6
Trim62Q80V85 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim62Q80V85 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Trim62Q80V85 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Trim62Q80V85 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim62Q80V85 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC5.03□□□□□ -1.6
Trim62Q80V85 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Trim62Q80V85 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Trim62Q80V85 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Trim62Q80V85 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trim62Q80V85 AC168056.3-201ENSMUST00000225395 2540 ntBASIC5.02□□□□□ -1.61
Trim62Q80V85 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Trim62Q80V85 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.02□□□□□ -1.61
Trim62Q80V85 AC190403.1-201ENSMUST00000224515 1325 ntBASIC5.02□□□□□ -1.61
Trim62Q80V85 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trim62Q80V85 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trim62Q80V85 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.02□□□□□ -1.61
Trim62Q80V85 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Trim62Q80V85 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.02□□□□□ -1.61
Trim62Q80V85 Gm16089-201ENSMUST00000117679 336 ntBASIC5.02□□□□□ -1.61
Trim62Q80V85 Gm23229-201ENSMUST00000157297 105 ntBASIC5.02□□□□□ -1.61
Trim62Q80V85 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trim62Q80V85 Gm8214-201ENSMUST00000172123 351 ntBASIC5.02□□□□□ -1.61
Trim62Q80V85 Gm20397-201ENSMUST00000174520 362 ntBASIC5.02□□□□□ -1.61
Trim62Q80V85 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.02□□□□□ -1.61
Trim62Q80V85 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC5.02□□□□□ -1.61
Trim62Q80V85 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trim62Q80V85 Gm36986-201ENSMUST00000195320 353 ntBASIC5.02□□□□□ -1.61
Trim62Q80V85 Gm44402-201ENSMUST00000203677 238 ntBASIC5.02□□□□□ -1.61
Trim62Q80V85 AC105169.1-201ENSMUST00000218912 1294 ntBASIC5.02□□□□□ -1.61
Trim62Q80V85 AC127279.1-201ENSMUST00000220140 637 ntBASIC5.02□□□□□ -1.61
Trim62Q80V85 AC131117.1-201ENSMUST00000225154 1171 ntBASIC5.02□□□□□ -1.61
Trim62Q80V85 AC140209.1-204ENSMUST00000226736 739 ntBASIC5.02□□□□□ -1.61
Trim62Q80V85 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Trim62Q80V85 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Trim62Q80V85 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Trim62Q80V85 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trim62Q80V85 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.02□□□□□ -1.61
Trim62Q80V85 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Trim62Q80V85 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms