Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm38189-201ENSMUST00000194495 1457 ntBASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Gm13149-201ENSMUST00000122071 339 ntBASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Gm3531-201ENSMUST00000162698 489 ntBASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Gm3091-201ENSMUST00000163408 484 ntBASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Gm17194-201ENSMUST00000164610 348 ntBASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Gm27820-201ENSMUST00000183628 175 ntBASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Gm37073-201ENSMUST00000192469 1222 ntBASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Gm18150-201ENSMUST00000195341 645 ntBASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Gm2142-201ENSMUST00000197899 589 ntBASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Gm43345-201ENSMUST00000199484 269 ntBASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Gm31532-201ENSMUST00000203555 767 ntBASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Gm44559-201ENSMUST00000207177 1012 ntBASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Gm5176-201ENSMUST00000218244 1227 ntBASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Gm18338-201ENSMUST00000222381 560 ntBASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Gm19786-201ENSMUST00000222589 580 ntBASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 AC132918.1-201ENSMUST00000227877 925 ntBASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 AC131178.1-201ENSMUST00000228649 492 ntBASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 AC112972.2-201ENSMUST00000228702 2210 ntBASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 AC124516.3-201ENSMUST00000221302 3613 ntBASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
Ddx55Q6ZPL9 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Gm24469-201ENSMUST00000104487 131 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Gm13491-201ENSMUST00000118267 235 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Gm14985-201ENSMUST00000118693 786 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Gm15390-201ENSMUST00000120323 738 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Gm3835-201ENSMUST00000120752 403 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Gm5699-201ENSMUST00000152491 723 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Gm15740-201ENSMUST00000159703 1292 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Gm8214-201ENSMUST00000172123 351 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Gm26970-201ENSMUST00000182990 964 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Gm5511-201ENSMUST00000189380 802 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Gm36974-201ENSMUST00000194200 1071 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Gm44300-201ENSMUST00000196792 121 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Gm22897-202ENSMUST00000197782 127 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Gm44403-201ENSMUST00000198554 129 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Gm44023-201ENSMUST00000203710 469 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 AC124732.4-201ENSMUST00000220930 1274 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 AC140210.1-201ENSMUST00000224961 534 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 AC102815.1-201ENSMUST00000226662 1061 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Gm24035-201ENSMUST00000082867 107 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Gm26072-201ENSMUST00000083135 107 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 AC153144.1-201ENSMUST00000221759 3139 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Gm42503-201ENSMUST00000199080 3706 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 AC116726.1-201ENSMUST00000215028 3497 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Gm38190-201ENSMUST00000192350 4755 ntBASIC6.1□□□□□ -1.43
Ddx55Q6ZPL9 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Ddx55Q6ZPL9 CT009480.3-201ENSMUST00000224051 3032 ntBASIC6.09□□□□□ -1.43
Ddx55Q6ZPL9 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC6.09□□□□□ -1.43
Ddx55Q6ZPL9 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.43
Ddx55Q6ZPL9 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms