Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC5.53□□□□□ -1.52
Ccdc88aQ5SNZ0 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc88aQ5SNZ0 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.53□□□□□ -1.52
Ccdc88aQ5SNZ0 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm44676-201ENSMUST00000208520 3055 ntBASIC5.53□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm42549-201ENSMUST00000202392 7004 ntBASIC5.53□□□□□ -1.52
Ccdc88aQ5SNZ0 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC5.53□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC5.53□□□□□ -1.52
Ccdc88aQ5SNZ0 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC5.53□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm22986-201ENSMUST00000122753 130 ntBASIC5.53□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC5.53□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm23905-201ENSMUST00000157568 109 ntBASIC5.53□□□□□ -1.52
Ccdc88aQ5SNZ0 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm3675-201ENSMUST00000175904 1653 ntBASIC5.53□□□□□ -1.52
Ccdc88aQ5SNZ0 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.53□□□□□ -1.52
Ccdc88aQ5SNZ0 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc88aQ5SNZ0 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Ccdc88aQ5SNZ0 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ccdc88aQ5SNZ0 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ccdc88aQ5SNZ0 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.52
Ccdc88aQ5SNZ0 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm38105-201ENSMUST00000192112 2621 ntBASIC5.52□□□□□ -1.53
Ccdc88aQ5SNZ0 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm14909-201ENSMUST00000117853 351 ntBASIC5.52□□□□□ -1.53
Ccdc88aQ5SNZ0 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC5.52□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm12704-201ENSMUST00000119789 464 ntBASIC5.52□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC5.52□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC5.52□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm25846-201ENSMUST00000158013 135 ntBASIC5.52□□□□□ -1.53
Ccdc88aQ5SNZ0 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.52□□□□□ -1.53
Ccdc88aQ5SNZ0 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.52□□□□□ -1.53
Ccdc88aQ5SNZ0 Dlx6os1-204ENSMUST00000184182 146 ntBASIC5.52□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm37097-201ENSMUST00000193676 336 ntBASIC5.52□□□□□ -1.53
Ccdc88aQ5SNZ0 AC154305.1-201ENSMUST00000224443 450 ntBASIC5.52□□□□□ -1.53
Ccdc88aQ5SNZ0 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.52□□□□□ -1.53
Ccdc88aQ5SNZ0 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ccdc88aQ5SNZ0 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc88aQ5SNZ0 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.52□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm42494-201ENSMUST00000196515 3051 ntBASIC5.52□□□□□ -1.53
Ccdc88aQ5SNZ0 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC5.52□□□□□ -1.53
Ccdc88aQ5SNZ0 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm25595-201ENSMUST00000102273 97 ntBASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm24124-201ENSMUST00000104103 132 ntBASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm24792-201ENSMUST00000104286 128 ntBASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm15981-201ENSMUST00000119196 457 ntBASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm4912-201ENSMUST00000122212 1044 ntBASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm8919-201ENSMUST00000182028 1014 ntBASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm32536-201ENSMUST00000205209 445 ntBASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 AC153516.1-201ENSMUST00000217955 779 ntBASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 AC121137.1-201ENSMUST00000225272 602 ntBASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 AC098742.1-201ENSMUST00000227945 373 ntBASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm23300-201ENSMUST00000082712 125 ntBASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm11742-201ENSMUST00000119903 233 ntBASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm13484-201ENSMUST00000120738 412 ntBASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm15057-201ENSMUST00000121516 534 ntBASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm23789-201ENSMUST00000122536 301 ntBASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm24689-201ENSMUST00000157760 104 ntBASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm24534-201ENSMUST00000157949 291 ntBASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm19807-201ENSMUST00000173971 667 ntBASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm29138-201ENSMUST00000191444 348 ntBASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm37243-201ENSMUST00000193407 595 ntBASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm43580-201ENSMUST00000202892 284 ntBASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm45007-201ENSMUST00000206237 366 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms