Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Gm25655-201ENSMUST00000158465 290 ntBASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Gm29484-201ENSMUST00000186067 324 ntBASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Gm9038-201ENSMUST00000203400 604 ntBASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Gm7333-201ENSMUST00000213449 1060 ntBASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Gm6906-201ENSMUST00000218014 569 ntBASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 AC123534.1-201ENSMUST00000224060 656 ntBASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Gm23302-201ENSMUST00000082710 100 ntBASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Gm24166-201ENSMUST00000082724 135 ntBASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.81□□□□□ -1.64
Trafd1Q3UDK1 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm37217-201ENSMUST00000194017 3521 ntBASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm24160-201ENSMUST00000104594 126 ntBASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm11970-201ENSMUST00000116105 320 ntBASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm14909-201ENSMUST00000117853 351 ntBASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm15421-202ENSMUST00000118224 399 ntBASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm15745-201ENSMUST00000119807 115 ntBASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm14125-202ENSMUST00000120921 756 ntBASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm17081-201ENSMUST00000167363 478 ntBASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm28385-201ENSMUST00000185671 292 ntBASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm29161-201ENSMUST00000188250 699 ntBASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm43408-201ENSMUST00000198263 440 ntBASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm44648-201ENSMUST00000208267 329 ntBASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm18127-201ENSMUST00000208479 725 ntBASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm19073-201ENSMUST00000219978 555 ntBASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm6171-201ENSMUST00000220760 645 ntBASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm2099-201ENSMUST00000220979 412 ntBASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm9512-201ENSMUST00000223112 497 ntBASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm7040-201ENSMUST00000223271 443 ntBASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC4.8□□□□□ -1.64
Trafd1Q3UDK1 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Gm45644-201ENSMUST00000210255 2740 ntBASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Gm14516-201ENSMUST00000120012 252 ntBASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Gm13132-201ENSMUST00000121194 472 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms