Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trim43aQ3TL54 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Trim43aQ3TL54 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim43aQ3TL54 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Trim43aQ3TL54 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC5.13□□□□□ -1.59
Trim43aQ3TL54 Gm25389-201ENSMUST00000157340 286 ntBASIC5.13□□□□□ -1.59
Trim43aQ3TL54 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim43aQ3TL54 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC5.13□□□□□ -1.59
Trim43aQ3TL54 Mir7012-201ENSMUST00000183900 64 ntBASIC5.13□□□□□ -1.59
Trim43aQ3TL54 Gm28967-201ENSMUST00000187351 281 ntBASIC5.13□□□□□ -1.59
Trim43aQ3TL54 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim43aQ3TL54 Gm37243-201ENSMUST00000193407 595 ntBASIC5.13□□□□□ -1.59
Trim43aQ3TL54 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC5.13□□□□□ -1.59
Trim43aQ3TL54 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim43aQ3TL54 Gm44038-201ENSMUST00000203952 889 ntBASIC5.13□□□□□ -1.59
Trim43aQ3TL54 Gm44523-201ENSMUST00000205616 417 ntBASIC5.13□□□□□ -1.59
Trim43aQ3TL54 Gm44559-201ENSMUST00000207177 1012 ntBASIC5.13□□□□□ -1.59
Trim43aQ3TL54 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Trim43aQ3TL54 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC5.13□□□□□ -1.59
Trim43aQ3TL54 Gm19189-201ENSMUST00000221689 754 ntBASIC5.13□□□□□ -1.59
Trim43aQ3TL54 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Trim43aQ3TL54 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trim43aQ3TL54 Gm21037-201ENSMUST00000209086 2608 ntBASIC5.13□□□□□ -1.59
Trim43aQ3TL54 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trim43aQ3TL54 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim43aQ3TL54 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Trim43aQ3TL54 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trim43aQ3TL54 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Trim43aQ3TL54 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Trim43aQ3TL54 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Trim43aQ3TL54 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC5.13□□□□□ -1.59
Trim43aQ3TL54 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trim43aQ3TL54 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Gm2033-201ENSMUST00000210753 2287 ntBASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Gm7709-201ENSMUST00000199391 1858 ntBASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Gm25419-201ENSMUST00000104215 191 ntBASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.12□□□□□ -1.59
Trim43aQ3TL54 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Gm5777-201ENSMUST00000177265 448 ntBASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Mir6416-201ENSMUST00000183664 117 ntBASIC5.12□□□□□ -1.59
Trim43aQ3TL54 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Gm38150-201ENSMUST00000192996 452 ntBASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim43aQ3TL54 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Gm24166-201ENSMUST00000082724 135 ntBASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Gm43313-201ENSMUST00000201398 2235 ntBASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Trim43aQ3TL54 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim43aQ3TL54 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim43aQ3TL54 AC162938.2-205ENSMUST00000217551 2828 ntBASIC5.11□□□□□ -1.59
Trim43aQ3TL54 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim43aQ3TL54 Gm42842-201ENSMUST00000197736 3004 ntBASIC5.11□□□□□ -1.59
Trim43aQ3TL54 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim43aQ3TL54 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim43aQ3TL54 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
Trim43aQ3TL54 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim43aQ3TL54 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim43aQ3TL54 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim43aQ3TL54 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim43aQ3TL54 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim43aQ3TL54 Gm11912-201ENSMUST00000117235 264 ntBASIC5.11□□□□□ -1.59
Trim43aQ3TL54 Gm12261-201ENSMUST00000117499 645 ntBASIC5.11□□□□□ -1.59
Trim43aQ3TL54 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC5.11□□□□□ -1.59
Trim43aQ3TL54 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim43aQ3TL54 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC5.11□□□□□ -1.59
Trim43aQ3TL54 Gm16345-201ENSMUST00000146065 158 ntBASIC5.11□□□□□ -1.59
Trim43aQ3TL54 Gm11507-201ENSMUST00000156462 412 ntBASIC5.11□□□□□ -1.59
Trim43aQ3TL54 Gm24690-201ENSMUST00000157759 97 ntBASIC5.11□□□□□ -1.59
Trim43aQ3TL54 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim43aQ3TL54 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim43aQ3TL54 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim43aQ3TL54 Gm27355-201ENSMUST00000185045 128 ntBASIC5.11□□□□□ -1.59
Trim43aQ3TL54 AC158807.1-201ENSMUST00000217959 187 ntBASIC5.11□□□□□ -1.59
Trim43aQ3TL54 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC5.11□□□□□ -1.59
Trim43aQ3TL54 AC153840.1-201ENSMUST00000219685 313 ntBASIC5.11□□□□□ -1.59
Trim43aQ3TL54 AC131745.2-201ENSMUST00000225736 565 ntBASIC5.11□□□□□ -1.59
Trim43aQ3TL54 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.11□□□□□ -1.59
Trim43aQ3TL54 Gm23972-201ENSMUST00000083322 165 ntBASIC5.11□□□□□ -1.59
Trim43aQ3TL54 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms