Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col17a1Q07563 Gm24314-201ENSMUST00000158274 123 ntBASIC7.82□□□□□ -1.16
Col17a1Q07563 Gm25348-201ENSMUST00000158961 111 ntBASIC7.82□□□□□ -1.16
Col17a1Q07563 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Col17a1Q07563 Gm37054-201ENSMUST00000193481 543 ntBASIC7.82□□□□□ -1.16
Col17a1Q07563 Gm38040-201ENSMUST00000193505 225 ntBASIC7.82□□□□□ -1.16
Col17a1Q07563 Gm43104-201ENSMUST00000197234 311 ntBASIC7.82□□□□□ -1.16
Col17a1Q07563 AC124562.1-201ENSMUST00000224673 337 ntBASIC7.82□□□□□ -1.16
Col17a1Q07563 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col17a1Q07563 Gm5185-201ENSMUST00000080271 619 ntBASIC7.82□□□□□ -1.16
Col17a1Q07563 n-R5s88-201ENSMUST00000083173 118 ntBASIC7.82□□□□□ -1.16
Col17a1Q07563 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col17a1Q07563 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC7.82□□□□□ -1.16
Col17a1Q07563 CT009480.1-201ENSMUST00000225771 4480 ntBASIC7.82□□□□□ -1.16
Col17a1Q07563 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
Col17a1Q07563 AC159193.1-201ENSMUST00000222872 2517 ntBASIC7.82□□□□□ -1.16
Col17a1Q07563 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col17a1Q07563 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col17a1Q07563 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col17a1Q07563 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col17a1Q07563 Gm37370-201ENSMUST00000191996 1410 ntBASIC7.82□□□□□ -1.16
Col17a1Q07563 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
Col17a1Q07563 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC7.82□□□□□ -1.16
Col17a1Q07563 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col17a1Q07563 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col17a1Q07563 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Col17a1Q07563 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC7.81□□□□□ -1.16
Col17a1Q07563 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col17a1Q07563 Gm12717-201ENSMUST00000118427 983 ntBASIC7.81□□□□□ -1.16
Col17a1Q07563 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col17a1Q07563 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC7.81□□□□□ -1.16
Col17a1Q07563 Gm22059-201ENSMUST00000157544 104 ntBASIC7.81□□□□□ -1.16
Col17a1Q07563 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Col17a1Q07563 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Col17a1Q07563 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Col17a1Q07563 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Col17a1Q07563 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Col17a1Q07563 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col17a1Q07563 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Col17a1Q07563 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC7.81□□□□□ -1.16
Col17a1Q07563 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col17a1Q07563 AC241593.2-201ENSMUST00000225099 510 ntBASIC7.81□□□□□ -1.16
Col17a1Q07563 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col17a1Q07563 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col17a1Q07563 Mir20a-201ENSMUST00000083508 107 ntBASIC7.81□□□□□ -1.16
Col17a1Q07563 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col17a1Q07563 Gm44801-201ENSMUST00000207644 2060 ntBASIC7.81□□□□□ -1.16
Col17a1Q07563 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC7.81□□□□□ -1.16
Col17a1Q07563 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col17a1Q07563 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Col17a1Q07563 Gm15583-201ENSMUST00000116191 3510 ntBASIC7.81□□□□□ -1.16
Col17a1Q07563 Gm43502-201ENSMUST00000200263 2596 ntBASIC7.81□□□□□ -1.16
Col17a1Q07563 Gm11393-201ENSMUST00000118019 288 ntBASIC7.81□□□□□ -1.16
Col17a1Q07563 Gm12458-201ENSMUST00000119387 495 ntBASIC7.81□□□□□ -1.16
Col17a1Q07563 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col17a1Q07563 Gm21909-201ENSMUST00000178260 439 ntBASIC7.81□□□□□ -1.16
Col17a1Q07563 Gm27025-201ENSMUST00000182392 942 ntBASIC7.81□□□□□ -1.16
Col17a1Q07563 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC7.81□□□□□ -1.16
Col17a1Q07563 Gm4248-201ENSMUST00000196905 316 ntBASIC7.81□□□□□ -1.16
Col17a1Q07563 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC7.81□□□□□ -1.16
Col17a1Q07563 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Col17a1Q07563 CT010505.1-201ENSMUST00000227026 396 ntBASIC7.81□□□□□ -1.16
Col17a1Q07563 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col17a1Q07563 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Col17a1Q07563 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Col17a1Q07563 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Col17a1Q07563 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col17a1Q07563 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col17a1Q07563 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Col17a1Q07563 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col17a1Q07563 AC124516.3-201ENSMUST00000221302 3613 ntBASIC7.8□□□□□ -1.16
Col17a1Q07563 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col17a1Q07563 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC7.8□□□□□ -1.16
Col17a1Q07563 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
Col17a1Q07563 Gm43027-201ENSMUST00000202906 3691 ntBASIC7.8□□□□□ -1.16
Col17a1Q07563 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
Col17a1Q07563 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col17a1Q07563 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC7.8□□□□□ -1.16
Col17a1Q07563 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC7.8□□□□□ -1.16
Col17a1Q07563 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col17a1Q07563 Gm29730-201ENSMUST00000192986 1396 ntBASIC7.8□□□□□ -1.16
Col17a1Q07563 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col17a1Q07563 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Col17a1Q07563 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Col17a1Q07563 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
Col17a1Q07563 Gm22143-201ENSMUST00000157401 203 ntBASIC7.8□□□□□ -1.16
Col17a1Q07563 Gm22816-201ENSMUST00000157450 117 ntBASIC7.8□□□□□ -1.16
Col17a1Q07563 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Col17a1Q07563 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC7.8□□□□□ -1.16
Col17a1Q07563 Gm27033-201ENSMUST00000183226 544 ntBASIC7.8□□□□□ -1.16
Col17a1Q07563 Gm27249-201ENSMUST00000185049 328 ntBASIC7.8□□□□□ -1.16
Col17a1Q07563 Gm29072-201ENSMUST00000191149 678 ntBASIC7.8□□□□□ -1.16
Col17a1Q07563 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC7.8□□□□□ -1.16
Col17a1Q07563 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC7.8□□□□□ -1.16
Col17a1Q07563 Gm43039-201ENSMUST00000202883 963 ntBASIC7.8□□□□□ -1.16
Col17a1Q07563 Gm19921-201ENSMUST00000210505 703 ntBASIC7.8□□□□□ -1.16
Col17a1Q07563 Gm6841-201ENSMUST00000220602 598 ntBASIC7.8□□□□□ -1.16
Col17a1Q07563 Gm19154-201ENSMUST00000223330 940 ntBASIC7.8□□□□□ -1.16
Col17a1Q07563 AC140344.1-201ENSMUST00000223384 387 ntBASIC7.8□□□□□ -1.16
Col17a1Q07563 Mir132-201ENSMUST00000083603 66 ntBASIC7.8□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms