Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NcanP55066 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
NcanP55066 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NcanP55066 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NcanP55066 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
NcanP55066 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NcanP55066 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NcanP55066 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
NcanP55066 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NcanP55066 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
NcanP55066 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
NcanP55066 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.36□□□□□ -1.55
NcanP55066 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NcanP55066 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NcanP55066 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NcanP55066 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NcanP55066 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NcanP55066 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
NcanP55066 Gm13311-201ENSMUST00000117863 379 ntBASIC5.36□□□□□ -1.55
NcanP55066 Gm12423-201ENSMUST00000118334 135 ntBASIC5.36□□□□□ -1.55
NcanP55066 Gm1866-201ENSMUST00000120701 477 ntBASIC5.36□□□□□ -1.55
NcanP55066 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC5.36□□□□□ -1.55
NcanP55066 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NcanP55066 Gm16260-201ENSMUST00000155141 304 ntBASIC5.36□□□□□ -1.55
NcanP55066 Gm24505-201ENSMUST00000157682 126 ntBASIC5.36□□□□□ -1.55
NcanP55066 Gm25438-201ENSMUST00000158281 110 ntBASIC5.36□□□□□ -1.55
NcanP55066 Gm20428-201ENSMUST00000174365 283 ntBASIC5.36□□□□□ -1.55
NcanP55066 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC5.36□□□□□ -1.55
NcanP55066 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NcanP55066 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC5.36□□□□□ -1.55
NcanP55066 Gm38011-201ENSMUST00000193312 279 ntBASIC5.36□□□□□ -1.55
NcanP55066 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC5.36□□□□□ -1.55
NcanP55066 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.36□□□□□ -1.55
NcanP55066 AC171206.1-201ENSMUST00000213612 213 ntBASIC5.36□□□□□ -1.55
NcanP55066 Gm18899-201ENSMUST00000217663 546 ntBASIC5.36□□□□□ -1.55
NcanP55066 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC5.36□□□□□ -1.55
NcanP55066 Apoo-ps-201ENSMUST00000061241 586 ntBASIC5.36□□□□□ -1.55
NcanP55066 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
NcanP55066 Gm25260-201ENSMUST00000083053 134 ntBASIC5.36□□□□□ -1.55
NcanP55066 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NcanP55066 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
NcanP55066 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NcanP55066 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NcanP55066 CT009734.1-201ENSMUST00000227657 1687 ntBASIC5.36□□□□□ -1.55
NcanP55066 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
NcanP55066 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.36□□□□□ -1.55
NcanP55066 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NcanP55066 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
NcanP55066 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.36□□□□□ -1.55
NcanP55066 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.36□□□□□ -1.55
NcanP55066 AC154677.1-201ENSMUST00000227636 2805 ntBASIC5.36□□□□□ -1.55
NcanP55066 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
NcanP55066 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NcanP55066 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
NcanP55066 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NcanP55066 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NcanP55066 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
NcanP55066 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NcanP55066 AC126439.1-201ENSMUST00000226772 2104 ntBASIC5.35□□□□□ -1.55
NcanP55066 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
NcanP55066 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NcanP55066 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.35□□□□□ -1.55
NcanP55066 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NcanP55066 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NcanP55066 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
NcanP55066 Gm24127-201ENSMUST00000104110 130 ntBASIC5.35□□□□□ -1.55
NcanP55066 Gm11486-201ENSMUST00000107322 478 ntBASIC5.35□□□□□ -1.55
NcanP55066 Gm15779-201ENSMUST00000117470 412 ntBASIC5.35□□□□□ -1.55
NcanP55066 Gm12985-201ENSMUST00000118376 183 ntBASIC5.35□□□□□ -1.55
NcanP55066 Gm12852-201ENSMUST00000119478 719 ntBASIC5.35□□□□□ -1.55
NcanP55066 Gm11617-201ENSMUST00000119609 639 ntBASIC5.35□□□□□ -1.55
NcanP55066 Gm11761-201ENSMUST00000121392 445 ntBASIC5.35□□□□□ -1.55
NcanP55066 Gm4487-201ENSMUST00000150617 442 ntBASIC5.35□□□□□ -1.55
NcanP55066 Gm24998-201ENSMUST00000157908 89 ntBASIC5.35□□□□□ -1.55
NcanP55066 Gm24553-201ENSMUST00000158653 131 ntBASIC5.35□□□□□ -1.55
NcanP55066 Gm3077-201ENSMUST00000165903 627 ntBASIC5.35□□□□□ -1.55
NcanP55066 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
NcanP55066 Ang-ps2-201ENSMUST00000178173 433 ntBASIC5.35□□□□□ -1.55
NcanP55066 Gm29356-201ENSMUST00000186935 373 ntBASIC5.35□□□□□ -1.55
NcanP55066 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.35□□□□□ -1.55
NcanP55066 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.35□□□□□ -1.55
NcanP55066 Gm18985-201ENSMUST00000196472 1079 ntBASIC5.35□□□□□ -1.55
NcanP55066 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC5.35□□□□□ -1.55
NcanP55066 Gm4410-201ENSMUST00000199349 686 ntBASIC5.35□□□□□ -1.55
NcanP55066 Gm44402-201ENSMUST00000203677 238 ntBASIC5.35□□□□□ -1.55
NcanP55066 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC5.35□□□□□ -1.55
NcanP55066 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC5.35□□□□□ -1.55
NcanP55066 Gm7588-201ENSMUST00000216866 571 ntBASIC5.35□□□□□ -1.55
NcanP55066 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NcanP55066 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.35□□□□□ -1.55
NcanP55066 AC154562.1-201ENSMUST00000226140 966 ntBASIC5.35□□□□□ -1.55
NcanP55066 AC151902.1-201ENSMUST00000227800 375 ntBASIC5.35□□□□□ -1.55
NcanP55066 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
NcanP55066 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC5.35□□□□□ -1.55
NcanP55066 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
NcanP55066 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NcanP55066 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NcanP55066 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NcanP55066 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NcanP55066 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms