Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Llph-ps2-201ENSMUST00000122000 393 ntBASIC6.34□□□□□ -1.39
Sox1P53783 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sox1P53783 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sox1P53783 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sox1P53783 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC6.34□□□□□ -1.39
Sox1P53783 Mir1963-201ENSMUST00000158594 59 ntBASIC6.34□□□□□ -1.39
Sox1P53783 Gm23028-201ENSMUST00000158773 265 ntBASIC6.34□□□□□ -1.39
Sox1P53783 Gm15946-201ENSMUST00000160654 423 ntBASIC6.34□□□□□ -1.39
Sox1P53783 Mir199b-201ENSMUST00000175066 110 ntBASIC6.34□□□□□ -1.39
Sox1P53783 Gm21815-201ENSMUST00000178213 664 ntBASIC6.34□□□□□ -1.39
Sox1P53783 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC6.34□□□□□ -1.39
Sox1P53783 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC6.34□□□□□ -1.39
Sox1P53783 Gm28474-201ENSMUST00000188501 315 ntBASIC6.34□□□□□ -1.39
Sox1P53783 Gm7368-201ENSMUST00000213307 367 ntBASIC6.34□□□□□ -1.39
Sox1P53783 Gm5119-201ENSMUST00000215858 634 ntBASIC6.34□□□□□ -1.39
Sox1P53783 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC6.34□□□□□ -1.39
Sox1P53783 Gm8681-201ENSMUST00000219115 618 ntBASIC6.34□□□□□ -1.39
Sox1P53783 Gm20368-201ENSMUST00000220716 301 ntBASIC6.34□□□□□ -1.39
Sox1P53783 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC6.34□□□□□ -1.39
Sox1P53783 AC124433.2-201ENSMUST00000223867 291 ntBASIC6.34□□□□□ -1.39
Sox1P53783 AC168059.1-201ENSMUST00000225846 841 ntBASIC6.34□□□□□ -1.39
Sox1P53783 AC163664.2-201ENSMUST00000228894 459 ntBASIC6.34□□□□□ -1.39
Sox1P53783 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Sox1P53783 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Sox1P53783 Gm24043-201ENSMUST00000083108 116 ntBASIC6.34□□□□□ -1.39
Sox1P53783 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sox1P53783 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC6.34□□□□□ -1.39
Sox1P53783 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Sox1P53783 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sox1P53783 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sox1P53783 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.34□□□□□ -1.39
Sox1P53783 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Sox1P53783 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sox1P53783 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Sox1P53783 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
Sox1P53783 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Sox1P53783 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.4
Sox1P53783 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Sox1P53783 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Sox1P53783 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox1P53783 Gm7269-201ENSMUST00000210819 1373 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Sox1P53783 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox1P53783 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox1P53783 Gm19552-201ENSMUST00000194744 2833 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Sox1P53783 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Sox1P53783 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC6.33□□□□□ -1.4
Sox1P53783 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sox1P53783 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox1P53783 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox1P53783 Gm22273-201ENSMUST00000104040 132 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox1P53783 Gm9429-201ENSMUST00000117804 868 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Gm12370-201ENSMUST00000117809 604 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Gm14918-201ENSMUST00000118153 268 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Gm14930-201ENSMUST00000118864 652 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Gm14106-201ENSMUST00000119382 438 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Mup-ps21-201ENSMUST00000119998 448 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Gm7071-201ENSMUST00000120458 462 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Gm6031-201ENSMUST00000121314 1054 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Gm12396-201ENSMUST00000121600 306 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC6.33□□□□□ -1.4
Sox1P53783 Gm23513-201ENSMUST00000158181 133 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Gm23024-201ENSMUST00000158770 292 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sox1P53783 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Sox1P53783 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Sox1P53783 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Sox1P53783 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Sox1P53783 Gm22166-201ENSMUST00000178419 121 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Gm23288-201ENSMUST00000179213 121 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Sox1P53783 Gm37689-201ENSMUST00000193139 275 ntBASIC6.33□□□□□ -1.4
Sox1P53783 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sox1P53783 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sox1P53783 Gm43892-201ENSMUST00000204373 265 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC6.33□□□□□ -1.4
Sox1P53783 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC6.33□□□□□ -1.4
Sox1P53783 AC153505.2-201ENSMUST00000217741 277 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Gm9231-201ENSMUST00000220817 1009 ntBASIC6.33□□□□□ -1.4
Sox1P53783 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sox1P53783 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox1P53783 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox1P53783 Gm22810-201ENSMUST00000082741 158 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Gm23459-201ENSMUST00000083259 131 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Mir412-201ENSMUST00000083636 80 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Sox1P53783 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox1P53783 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox1P53783 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Sox1P53783 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
Sox1P53783 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sox1P53783 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC6.33□□□□□ -1.4
Sox1P53783 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Sox1P53783 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 110 ms