Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm20679-201ENSMUST00000177285 1402 ntBASIC5.81□□□□□ -1.48
Shmt1P50431 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Shmt1P50431 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.81□□□□□ -1.48
Shmt1P50431 Gm43588-201ENSMUST00000201862 2298 ntBASIC5.81□□□□□ -1.48
Shmt1P50431 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Shmt1P50431 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Shmt1P50431 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Shmt1P50431 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Shmt1P50431 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Shmt1P50431 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Shmt1P50431 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Shmt1P50431 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Shmt1P50431 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Shmt1P50431 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Shmt1P50431 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Shmt1P50431 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Shmt1P50431 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Shmt1P50431 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Shmt1P50431 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Shmt1P50431 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Shmt1P50431 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Shmt1P50431 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Shmt1P50431 Gm23294-201ENSMUST00000104150 164 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Gm10936-201ENSMUST00000105264 252 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Gm14871-201ENSMUST00000119056 194 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Gm15785-201ENSMUST00000119145 694 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Gm14520-201ENSMUST00000119258 387 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Shmt1P50431 Gm15152-201ENSMUST00000121540 394 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Gm14589-201ENSMUST00000121640 727 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.8□□□□□ -1.48
Shmt1P50431 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC5.8□□□□□ -1.48
Shmt1P50431 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.8□□□□□ -1.48
Shmt1P50431 Gm22793-201ENSMUST00000157227 330 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Gm25430-201ENSMUST00000157614 289 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Gm26393-201ENSMUST00000157625 129 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Gm15812-201ENSMUST00000162331 748 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Shmt1P50431 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Gm5139-201ENSMUST00000175943 249 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Shmt1P50431 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Gm27044-201ENSMUST00000183033 796 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC5.8□□□□□ -1.48
Shmt1P50431 Gm28429-201ENSMUST00000188521 363 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Shmt1P50431 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Gm29454-201ENSMUST00000190805 393 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Gm38149-201ENSMUST00000191943 339 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Gm38261-201ENSMUST00000192608 316 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Gm37771-201ENSMUST00000193121 265 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Gm42438-201ENSMUST00000197832 974 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Gm43554-201ENSMUST00000199987 186 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Gm43198-201ENSMUST00000200927 326 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Gm44003-201ENSMUST00000203024 490 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Gm18325-201ENSMUST00000203228 835 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Gm4587-201ENSMUST00000209135 637 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Gm45628-201ENSMUST00000210849 274 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 AC121844.1-201ENSMUST00000218706 137 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC5.8□□□□□ -1.48
Shmt1P50431 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Shmt1P50431 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Shmt1P50431 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Shmt1P50431 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Shmt1P50431 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Shmt1P50431 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Shmt1P50431 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Shmt1P50431 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Shmt1P50431 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Shmt1P50431 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Shmt1P50431 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Shmt1P50431 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Shmt1P50431 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.8□□□□□ -1.48
Shmt1P50431 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Shmt1P50431 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.79□□□□□ -1.48
Shmt1P50431 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Shmt1P50431 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Shmt1P50431 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Shmt1P50431 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Shmt1P50431 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.79□□□□□ -1.48
Shmt1P50431 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Shmt1P50431 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Shmt1P50431 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Shmt1P50431 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC5.79□□□□□ -1.48
Shmt1P50431 Mir1188-201ENSMUST00000116756 120 ntBASIC5.79□□□□□ -1.48
Shmt1P50431 Gm25507-201ENSMUST00000116981 144 ntBASIC5.79□□□□□ -1.48
Shmt1P50431 Gm11447-201ENSMUST00000118983 858 ntBASIC5.79□□□□□ -1.48
Shmt1P50431 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms