Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 AC154755.1-201ENSMUST00000225244 537 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 AC125405.1-201ENSMUST00000226406 589 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 AC139197.1-201ENSMUST00000228332 813 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC7.08□□□□□ -1.28
Rfx1P48377 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC7.08□□□□□ -1.28
Rfx1P48377 Gm24036-201ENSMUST00000082868 156 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC7.08□□□□□ -1.28
Rfx1P48377 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC7.08□□□□□ -1.28
Rfx1P48377 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC7.08□□□□□ -1.28
Rfx1P48377 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Rfx1P48377 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Rfx1P48377 Fus-202ENSMUST00000079045 2623 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Rfx1P48377 Gm2223-201ENSMUST00000112099 1350 ntBASIC7.08□□□□□ -1.28
Rfx1P48377 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Rfx1P48377 Gm37773-201ENSMUST00000194141 2120 ntBASIC7.07□□□□□ -1.28
Rfx1P48377 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rfx1P48377 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rfx1P48377 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Rfx1P48377 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Rfx1P48377 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC7.07□□□□□ -1.28
Rfx1P48377 Mir465c-2-201ENSMUST00000104757 81 ntBASIC7.07□□□□□ -1.28
Rfx1P48377 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC7.07□□□□□ -1.28
Rfx1P48377 Gm8501-201ENSMUST00000117684 432 ntBASIC7.07□□□□□ -1.28
Rfx1P48377 Gm14677-201ENSMUST00000117866 486 ntBASIC7.07□□□□□ -1.28
Rfx1P48377 Gm12186-201ENSMUST00000119050 945 ntBASIC7.07□□□□□ -1.28
Rfx1P48377 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Rfx1P48377 Gm12322-201ENSMUST00000121605 389 ntBASIC7.07□□□□□ -1.28
Rfx1P48377 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC7.07□□□□□ -1.28
Rfx1P48377 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Rfx1P48377 Gm6264-201ENSMUST00000160802 624 ntBASIC7.07□□□□□ -1.28
Rfx1P48377 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC7.07□□□□□ -1.28
Rfx1P48377 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
Rfx1P48377 Gm24081-201ENSMUST00000175177 125 ntBASIC7.07□□□□□ -1.28
Rfx1P48377 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC7.07□□□□□ -1.28
Rfx1P48377 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC7.07□□□□□ -1.28
Rfx1P48377 Gm29156-201ENSMUST00000187764 499 ntBASIC7.07□□□□□ -1.28
Rfx1P48377 Gm28661-201ENSMUST00000188231 681 ntBASIC7.07□□□□□ -1.28
Rfx1P48377 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC7.07□□□□□ -1.28
Rfx1P48377 Gm18427-201ENSMUST00000195422 515 ntBASIC7.07□□□□□ -1.28
Rfx1P48377 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Rfx1P48377 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rfx1P48377 Gm8458-201ENSMUST00000196658 819 ntBASIC7.07□□□□□ -1.28
Rfx1P48377 Gm43070-201ENSMUST00000196938 415 ntBASIC7.07□□□□□ -1.28
Rfx1P48377 Gm42461-201ENSMUST00000198627 1150 ntBASIC7.07□□□□□ -1.28
Rfx1P48377 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC7.07□□□□□ -1.28
Rfx1P48377 Gm17991-201ENSMUST00000208139 297 ntBASIC7.07□□□□□ -1.28
Rfx1P48377 Gm45316-201ENSMUST00000210128 162 ntBASIC7.07□□□□□ -1.28
Rfx1P48377 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC7.07□□□□□ -1.28
Rfx1P48377 AC134334.1-201ENSMUST00000214277 255 ntBASIC7.07□□□□□ -1.28
Rfx1P48377 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC7.07□□□□□ -1.28
Rfx1P48377 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC7.07□□□□□ -1.28
Rfx1P48377 AC138667.2-201ENSMUST00000224880 598 ntBASIC7.07□□□□□ -1.28
Rfx1P48377 AC139758.1-201ENSMUST00000226573 930 ntBASIC7.07□□□□□ -1.28
Rfx1P48377 AC159979.1-201ENSMUST00000227927 342 ntBASIC7.07□□□□□ -1.28
Rfx1P48377 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Rfx1P48377 Mir465c-1-201ENSMUST00000093560 81 ntBASIC7.07□□□□□ -1.28
Rfx1P48377 Gm37880-201ENSMUST00000192216 3257 ntBASIC7.07□□□□□ -1.28
Rfx1P48377 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC7.07□□□□□ -1.28
Rfx1P48377 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Rfx1P48377 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Rfx1P48377 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC7.07□□□□□ -1.28
Rfx1P48377 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Rfx1P48377 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Rfx1P48377 Gm18880-201ENSMUST00000223333 1541 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 Gm10723-201ENSMUST00000195366 6918 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rfx1P48377 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Rfx1P48377 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Rfx1P48377 Gm336-201ENSMUST00000186376 1480 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Rfx1P48377 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Rfx1P48377 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Rfx1P48377 Gm22267-201ENSMUST00000104008 131 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 Gm13156-201ENSMUST00000118348 321 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 Gm13444-201ENSMUST00000119445 522 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 Gm2318-201ENSMUST00000119623 639 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 Gm15967-201ENSMUST00000120027 1116 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 Gm2768-201ENSMUST00000121062 250 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 Gm12152-201ENSMUST00000122465 684 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Rfx1P48377 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC7.06□□□□□ -1.28
Rfx1P48377 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Rfx1P48377 Gm7398-201ENSMUST00000178589 639 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 Gm7375-201ENSMUST00000179232 639 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 Gm3681-201ENSMUST00000179940 639 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 Mir3473f-201ENSMUST00000183743 136 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC7.06□□□□□ -1.28
Rfx1P48377 Gm22897-201ENSMUST00000197860 128 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 Gm43841-201ENSMUST00000199491 586 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC7.06□□□□□ -1.28
Rfx1P48377 Gm44961-201ENSMUST00000207450 196 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC7.06□□□□□ -1.28
Rfx1P48377 Gm45850-201ENSMUST00000212536 338 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 Gm20786-201ENSMUST00000212649 436 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 Gm21041-201ENSMUST00000214829 823 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC7.06□□□□□ -1.28
Rfx1P48377 AC159297.1-201ENSMUST00000218689 290 ntBASIC7.06□□□□□ -1.28
Rfx1P48377 Gm3565-201ENSMUST00000222670 609 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms