Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm38240-201ENSMUST00000195110 2487 ntBASIC5.13□□□□□ -1.59
Lire1P11260 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Lire1P11260 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.12□□□□□ -1.59
Lire1P11260 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
Lire1P11260 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Lire1P11260 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Lire1P11260 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.12□□□□□ -1.59
Lire1P11260 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
Lire1P11260 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Lire1P11260 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Lire1P11260 Gm14512-201ENSMUST00000117924 230 ntBASIC5.12□□□□□ -1.59
Lire1P11260 Gm13579-201ENSMUST00000118519 517 ntBASIC5.12□□□□□ -1.59
Lire1P11260 Gm14927-201ENSMUST00000120283 454 ntBASIC5.12□□□□□ -1.59
Lire1P11260 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Lire1P11260 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Lire1P11260 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC5.12□□□□□ -1.59
Lire1P11260 Gm25824-201ENSMUST00000157092 121 ntBASIC5.12□□□□□ -1.59
Lire1P11260 Scarna6-201ENSMUST00000158656 265 ntBASIC5.12□□□□□ -1.59
Lire1P11260 Mir3062-201ENSMUST00000174986 105 ntBASIC5.12□□□□□ -1.59
Lire1P11260 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Lire1P11260 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Lire1P11260 Gm29596-201ENSMUST00000185710 385 ntBASIC5.12□□□□□ -1.59
Lire1P11260 Mir1892-201ENSMUST00000197752 80 ntBASIC5.12□□□□□ -1.59
Lire1P11260 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Lire1P11260 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC5.12□□□□□ -1.59
Lire1P11260 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC5.12□□□□□ -1.59
Lire1P11260 AC154296.3-201ENSMUST00000214427 712 ntBASIC5.12□□□□□ -1.59
Lire1P11260 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Lire1P11260 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC5.12□□□□□ -1.59
Lire1P11260 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC5.12□□□□□ -1.59
Lire1P11260 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Lire1P11260 AC154452.1-201ENSMUST00000225819 241 ntBASIC5.12□□□□□ -1.59
Lire1P11260 AC154335.2-201ENSMUST00000225916 638 ntBASIC5.12□□□□□ -1.59
Lire1P11260 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Lire1P11260 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Lire1P11260 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Lire1P11260 Olfr878-201ENSMUST00000086061 1065 ntBASIC5.12□□□□□ -1.59
Lire1P11260 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Lire1P11260 Gm7754-201ENSMUST00000223075 2064 ntBASIC5.12□□□□□ -1.59
Lire1P11260 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Lire1P11260 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.12□□□□□ -1.59
Lire1P11260 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.12□□□□□ -1.59
Lire1P11260 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Lire1P11260 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Lire1P11260 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Lire1P11260 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Lire1P11260 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Lire1P11260 Gm22273-201ENSMUST00000104040 132 ntBASIC5.11□□□□□ -1.59
Lire1P11260 Gm11905-201ENSMUST00000117653 678 ntBASIC5.11□□□□□ -1.59
Lire1P11260 Gm12322-201ENSMUST00000121605 389 ntBASIC5.11□□□□□ -1.59
Lire1P11260 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.11□□□□□ -1.59
Lire1P11260 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC5.11□□□□□ -1.59
Lire1P11260 Gm25227-201ENSMUST00000158204 112 ntBASIC5.11□□□□□ -1.59
Lire1P11260 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.11□□□□□ -1.59
Lire1P11260 Mir3090-201ENSMUST00000175597 87 ntBASIC5.11□□□□□ -1.59
Lire1P11260 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC5.11□□□□□ -1.59
Lire1P11260 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Lire1P11260 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC5.11□□□□□ -1.59
Lire1P11260 Gm19214-201ENSMUST00000191956 1083 ntBASIC5.11□□□□□ -1.59
Lire1P11260 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.11□□□□□ -1.59
Lire1P11260 Gm2429-201ENSMUST00000194635 586 ntBASIC5.11□□□□□ -1.59
Lire1P11260 Gm43308-201ENSMUST00000197236 373 ntBASIC5.11□□□□□ -1.59
Lire1P11260 Gm43712-201ENSMUST00000198020 291 ntBASIC5.11□□□□□ -1.59
Lire1P11260 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.11□□□□□ -1.59
Lire1P11260 Gm45422-201ENSMUST00000211476 246 ntBASIC5.11□□□□□ -1.59
Lire1P11260 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.11□□□□□ -1.59
Lire1P11260 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Lire1P11260 AC091783.4-201ENSMUST00000224940 611 ntBASIC5.11□□□□□ -1.59
Lire1P11260 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Lire1P11260 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Lire1P11260 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
Lire1P11260 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Lire1P11260 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Lire1P11260 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Lire1P11260 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Lire1P11260 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Lire1P11260 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Lire1P11260 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.11□□□□□ -1.59
Lire1P11260 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.11□□□□□ -1.59
Lire1P11260 AC156560.3-201ENSMUST00000222978 3841 ntBASIC5.11□□□□□ -1.59
Lire1P11260 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Lire1P11260 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
Lire1P11260 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
Lire1P11260 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Lire1P11260 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Lire1P11260 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Lire1P11260 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.1□□□□□ -1.59
Lire1P11260 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Lire1P11260 Gm15185-201ENSMUST00000117397 746 ntBASIC5.1□□□□□ -1.59
Lire1P11260 Gm15660-201ENSMUST00000118997 478 ntBASIC5.1□□□□□ -1.59
Lire1P11260 Llph-ps1-201ENSMUST00000121281 390 ntBASIC5.1□□□□□ -1.59
Lire1P11260 Gm14679-201ENSMUST00000121536 722 ntBASIC5.1□□□□□ -1.59
Lire1P11260 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.1□□□□□ -1.59
Lire1P11260 Klra11-ps-201ENSMUST00000122033 810 ntBASIC5.1□□□□□ -1.59
Lire1P11260 Gm25839-201ENSMUST00000158921 103 ntBASIC5.1□□□□□ -1.59
Lire1P11260 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Lire1P11260 Gm8321-201ENSMUST00000181691 980 ntBASIC5.1□□□□□ -1.59
Lire1P11260 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC5.1□□□□□ -1.59
Lire1P11260 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC5.1□□□□□ -1.59
Lire1P11260 Gm29376-201ENSMUST00000189357 835 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms