Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm7613-201ENSMUST00000139070 487 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm25969-201ENSMUST00000157166 132 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm25989-201ENSMUST00000158761 133 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm25643-201ENSMUST00000158874 103 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm8323-201ENSMUST00000168436 1201 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm8161-201ENSMUST00000168739 481 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm20491-201ENSMUST00000173765 1241 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm5283-201ENSMUST00000177874 334 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm4904-201ENSMUST00000178243 1195 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm2871-201ENSMUST00000179984 1204 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm25412-201ENSMUST00000180258 107 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm27024-201ENSMUST00000182561 755 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm28283-201ENSMUST00000185509 178 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm28122-201ENSMUST00000187088 615 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm29652-201ENSMUST00000188622 615 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm28819-206ENSMUST00000188816 615 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm29079-201ENSMUST00000188875 615 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm29382-201ENSMUST00000189549 615 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm28654-201ENSMUST00000189801 379 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm29212-201ENSMUST00000190384 615 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm43243-201ENSMUST00000199964 278 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm44943-201ENSMUST00000207254 300 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm30646-201ENSMUST00000207662 180 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm10988-201ENSMUST00000209150 1088 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm35262-201ENSMUST00000215133 267 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm18541-201ENSMUST00000215935 538 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC5.46□□□□□ -1.54
Hoxd3P09027 AC124184.1-201ENSMUST00000218167 283 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 AC151904.5-201ENSMUST00000218975 549 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 AC127242.3-201ENSMUST00000222009 580 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 AC165157.1-201ENSMUST00000222981 580 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm9800-201ENSMUST00000052615 336 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Hoxd3P09027 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm5528-201ENSMUST00000076314 480 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm23451-201ENSMUST00000083328 122 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Hoxd3P09027 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm9314-201ENSMUST00000199881 1528 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm38156-201ENSMUST00000194601 2260 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Hoxd3P09027 Dennd6a-203ENSMUST00000224111 2692 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
Hoxd3P09027 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Hoxd3P09027 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Hoxd3P09027 AC139941.2-201ENSMUST00000221565 1824 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 AC164102.1-201ENSMUST00000220524 1553 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC5.46□□□□□ -1.54
Hoxd3P09027 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Hoxd3P09027 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm13712-201ENSMUST00000117484 2295 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm15109-201ENSMUST00000133085 2026 ntBASIC5.45□□□□□ -1.54
Hoxd3P09027 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Hoxd3P09027 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Hoxd3P09027 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Hoxd3P09027 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Hoxd3P09027 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC5.45□□□□□ -1.54
Hoxd3P09027 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Hoxd3P09027 Gm13378-201ENSMUST00000117483 336 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms