Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NpcdF8VQB8 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
NpcdF8VQB8 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NpcdF8VQB8 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC7.12□□□□□ -1.27
NpcdF8VQB8 Gm42658-201ENSMUST00000197199 1575 ntBASIC7.12□□□□□ -1.27
NpcdF8VQB8 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NpcdF8VQB8 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
NpcdF8VQB8 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Gm42894-201ENSMUST00000200788 3390 ntBASIC7.11□□□□□ -1.27
NpcdF8VQB8 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Gm13712-201ENSMUST00000117484 2295 ntBASIC7.11□□□□□ -1.27
NpcdF8VQB8 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Mir466n-201ENSMUST00000104798 94 ntBASIC7.11□□□□□ -1.27
NpcdF8VQB8 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Gm14510-201ENSMUST00000116165 1092 ntBASIC7.11□□□□□ -1.27
NpcdF8VQB8 Gm12102-201ENSMUST00000118251 604 ntBASIC7.11□□□□□ -1.27
NpcdF8VQB8 Gm14887-201ENSMUST00000119522 663 ntBASIC7.11□□□□□ -1.27
NpcdF8VQB8 Atf1-ps-201ENSMUST00000120608 810 ntBASIC7.11□□□□□ -1.27
NpcdF8VQB8 Gm15044-201ENSMUST00000120703 598 ntBASIC7.11□□□□□ -1.27
NpcdF8VQB8 Gm23212-201ENSMUST00000122718 60 ntBASIC7.11□□□□□ -1.27
NpcdF8VQB8 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NpcdF8VQB8 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
NpcdF8VQB8 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Snora81-201ENSMUST00000157310 178 ntBASIC7.11□□□□□ -1.27
NpcdF8VQB8 Gm22214-201ENSMUST00000157563 172 ntBASIC7.11□□□□□ -1.27
NpcdF8VQB8 Gm26159-201ENSMUST00000158968 104 ntBASIC7.11□□□□□ -1.27
NpcdF8VQB8 Gm17511-201ENSMUST00000172206 342 ntBASIC7.11□□□□□ -1.27
NpcdF8VQB8 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Mir6343-201ENSMUST00000183584 84 ntBASIC7.11□□□□□ -1.27
NpcdF8VQB8 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Gm29650-201ENSMUST00000188485 742 ntBASIC7.11□□□□□ -1.27
NpcdF8VQB8 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Gm20203-201ENSMUST00000192352 332 ntBASIC7.11□□□□□ -1.27
NpcdF8VQB8 Gm36999-201ENSMUST00000192756 1046 ntBASIC7.11□□□□□ -1.27
NpcdF8VQB8 Gm42818-201ENSMUST00000198869 987 ntBASIC7.11□□□□□ -1.27
NpcdF8VQB8 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC7.11□□□□□ -1.27
NpcdF8VQB8 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC7.11□□□□□ -1.27
NpcdF8VQB8 Gm5649-201ENSMUST00000217918 951 ntBASIC7.11□□□□□ -1.27
NpcdF8VQB8 AC158521.1-201ENSMUST00000225295 660 ntBASIC7.11□□□□□ -1.27
NpcdF8VQB8 AC160120.1-201ENSMUST00000227446 663 ntBASIC7.11□□□□□ -1.27
NpcdF8VQB8 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Gm42503-201ENSMUST00000199080 3706 ntBASIC7.11□□□□□ -1.27
NpcdF8VQB8 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
NpcdF8VQB8 Gm43498-201ENSMUST00000202002 1486 ntBASIC7.11□□□□□ -1.27
NpcdF8VQB8 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
NpcdF8VQB8 Gm14895-201ENSMUST00000121858 1361 ntBASIC7.1□□□□□ -1.27
NpcdF8VQB8 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC7.1□□□□□ -1.27
NpcdF8VQB8 Gm43781-201ENSMUST00000197634 2681 ntBASIC7.1□□□□□ -1.27
NpcdF8VQB8 AC124746.1-201ENSMUST00000227535 1300 ntBASIC7.1□□□□□ -1.27
NpcdF8VQB8 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
NpcdF8VQB8 Gm26146-201ENSMUST00000104478 185 ntBASIC7.1□□□□□ -1.27
NpcdF8VQB8 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NpcdF8VQB8 Gm15385-201ENSMUST00000118725 667 ntBASIC7.1□□□□□ -1.27
NpcdF8VQB8 Gm12006-201ENSMUST00000120786 403 ntBASIC7.1□□□□□ -1.27
NpcdF8VQB8 Mup-ps22-201ENSMUST00000121611 243 ntBASIC7.1□□□□□ -1.27
NpcdF8VQB8 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC7.1□□□□□ -1.27
NpcdF8VQB8 Gm15970-201ENSMUST00000160623 834 ntBASIC7.1□□□□□ -1.27
NpcdF8VQB8 Gm7316-201ENSMUST00000165395 445 ntBASIC7.1□□□□□ -1.27
NpcdF8VQB8 Gm20674-201ENSMUST00000177452 369 ntBASIC7.1□□□□□ -1.27
NpcdF8VQB8 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC7.1□□□□□ -1.27
NpcdF8VQB8 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NpcdF8VQB8 Gm29563-201ENSMUST00000187249 496 ntBASIC7.1□□□□□ -1.27
NpcdF8VQB8 Gm38291-201ENSMUST00000193671 259 ntBASIC7.1□□□□□ -1.27
NpcdF8VQB8 Gm43157-201ENSMUST00000198223 412 ntBASIC7.1□□□□□ -1.27
NpcdF8VQB8 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC7.1□□□□□ -1.27
NpcdF8VQB8 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC7.1□□□□□ -1.27
NpcdF8VQB8 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC7.1□□□□□ -1.27
NpcdF8VQB8 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NpcdF8VQB8 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC7.1□□□□□ -1.27
NpcdF8VQB8 Gm44984-201ENSMUST00000207802 394 ntBASIC7.1□□□□□ -1.27
NpcdF8VQB8 AC124445.1-201ENSMUST00000218613 452 ntBASIC7.1□□□□□ -1.27
NpcdF8VQB8 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC7.1□□□□□ -1.27
NpcdF8VQB8 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC7.1□□□□□ -1.27
NpcdF8VQB8 Gm18618-201ENSMUST00000222211 473 ntBASIC7.1□□□□□ -1.27
NpcdF8VQB8 AC133176.1-201ENSMUST00000226668 219 ntBASIC7.1□□□□□ -1.27
NpcdF8VQB8 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
NpcdF8VQB8 Gm23846-201ENSMUST00000083835 107 ntBASIC7.1□□□□□ -1.27
NpcdF8VQB8 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
NpcdF8VQB8 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
NpcdF8VQB8 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
NpcdF8VQB8 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NpcdF8VQB8 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NpcdF8VQB8 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms