Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Mir6899-201ENSMUST00000184798 64 ntBASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Gm29793-201ENSMUST00000202874 460 ntBASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Scn3aA2ASI5 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Gm14854-201ENSMUST00000117758 841 ntBASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Gm13220-201ENSMUST00000121535 508 ntBASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Gm23171-201ENSMUST00000157159 264 ntBASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Gm22326-201ENSMUST00000158897 351 ntBASIC5.23□□□□□ -1.57
Scn3aA2ASI5 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Scn3aA2ASI5 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Gm3077-201ENSMUST00000165903 627 ntBASIC5.23□□□□□ -1.57
Scn3aA2ASI5 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Gm23638-201ENSMUST00000175073 126 ntBASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Gm23158-201ENSMUST00000175076 126 ntBASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Gm22907-201ENSMUST00000175198 126 ntBASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Gm22625-201ENSMUST00000175382 126 ntBASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Gm22875-201ENSMUST00000175449 126 ntBASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Gm25197-201ENSMUST00000175516 126 ntBASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Gm27857-201ENSMUST00000176930 126 ntBASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Gm26268-201ENSMUST00000177685 126 ntBASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Gm23681-201ENSMUST00000178821 126 ntBASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Gm27286-201ENSMUST00000184934 179 ntBASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Gm37614-201ENSMUST00000195645 210 ntBASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Gm44485-201ENSMUST00000199569 137 ntBASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Gm37332-201ENSMUST00000195853 2844 ntBASIC5.23□□□□□ -1.57
Scn3aA2ASI5 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Gm18359-201ENSMUST00000173024 1459 ntBASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Igkv11-106-201ENSMUST00000103331 346 ntBASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Gm15012-201ENSMUST00000119176 106 ntBASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Gm15603-201ENSMUST00000119252 492 ntBASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Gm9294-201ENSMUST00000165198 789 ntBASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Gm13249-201ENSMUST00000177803 345 ntBASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Gm13144-201ENSMUST00000179385 345 ntBASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Gm43828-201ENSMUST00000196890 639 ntBASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Gm17737-201ENSMUST00000210183 1147 ntBASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Gm9616-201ENSMUST00000221154 781 ntBASIC5.22□□□□□ -1.57
Scn3aA2ASI5 AC158523.2-201ENSMUST00000222708 548 ntBASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Mir338-201ENSMUST00000083666 98 ntBASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.22□□□□□ -1.57
Scn3aA2ASI5 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scn3aA2ASI5 CT025675.1-201ENSMUST00000228171 1567 ntBASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.22□□□□□ -1.57
Scn3aA2ASI5 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Scn3aA2ASI5 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Scn3aA2ASI5 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Scn3aA2ASI5 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
Scn3aA2ASI5 Gm14304-201ENSMUST00000117272 446 ntBASIC5.21□□□□□ -1.57
Scn3aA2ASI5 Gm7312-201ENSMUST00000118798 469 ntBASIC5.21□□□□□ -1.57
Scn3aA2ASI5 Gm6884-201ENSMUST00000119318 615 ntBASIC5.21□□□□□ -1.57
Scn3aA2ASI5 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC5.21□□□□□ -1.57
Scn3aA2ASI5 Gm13232-201ENSMUST00000121816 632 ntBASIC5.21□□□□□ -1.57
Scn3aA2ASI5 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Scn3aA2ASI5 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
Scn3aA2ASI5 Gm17046-201ENSMUST00000168078 850 ntBASIC5.21□□□□□ -1.57
Scn3aA2ASI5 Gm20701-201ENSMUST00000176082 347 ntBASIC5.21□□□□□ -1.57
Scn3aA2ASI5 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Scn3aA2ASI5 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC5.21□□□□□ -1.57
Scn3aA2ASI5 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC5.21□□□□□ -1.57
Scn3aA2ASI5 AC129935.1-201ENSMUST00000226302 873 ntBASIC5.21□□□□□ -1.57
Scn3aA2ASI5 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
Scn3aA2ASI5 Gm7808-201ENSMUST00000082002 387 ntBASIC5.21□□□□□ -1.57
Scn3aA2ASI5 n-R5s7-201ENSMUST00000083755 121 ntBASIC5.21□□□□□ -1.57
Scn3aA2ASI5 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
Scn3aA2ASI5 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Scn3aA2ASI5 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms