Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm43015-201ENSMUST00000199087 565 ntBASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Gm4321-201ENSMUST00000200520 442 ntBASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Gm2011-203ENSMUST00000203750 435 ntBASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Gm7825-201ENSMUST00000204046 416 ntBASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Gm44820-201ENSMUST00000207420 396 ntBASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 AC163621.2-201ENSMUST00000222229 682 ntBASIC4.72□□□□□ -1.65
Trim3Q9R1R2 AC153153.2-201ENSMUST00000223572 411 ntBASIC4.72□□□□□ -1.65
Trim3Q9R1R2 AC121599.1-201ENSMUST00000224276 449 ntBASIC4.72□□□□□ -1.65
Trim3Q9R1R2 CT030662.2-201ENSMUST00000226942 805 ntBASIC4.72□□□□□ -1.65
Trim3Q9R1R2 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Gm23972-201ENSMUST00000083322 165 ntBASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Gm17101-201ENSMUST00000169520 1588 ntBASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 AC151904.4-201ENSMUST00000219868 1319 ntBASIC4.72□□□□□ -1.65
Trim3Q9R1R2 AC103672.3-201ENSMUST00000227649 3243 ntBASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Trim3Q9R1R2 AC170999.1-201ENSMUST00000226359 1585 ntBASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Gm7657-201ENSMUST00000118851 666 ntBASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Gm13435-201ENSMUST00000120111 1023 ntBASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Gm6542-201ENSMUST00000153606 772 ntBASIC4.71□□□□□ -1.66
Trim3Q9R1R2 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Gm27355-201ENSMUST00000185045 128 ntBASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Gm28877-201ENSMUST00000191349 604 ntBASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Gm38166-201ENSMUST00000191660 471 ntBASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Mir6994-201ENSMUST00000198985 73 ntBASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Gm42990-201ENSMUST00000199231 312 ntBASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Gm42643-201ENSMUST00000200504 279 ntBASIC4.71□□□□□ -1.66
Trim3Q9R1R2 AC121804.1-201ENSMUST00000221016 394 ntBASIC4.71□□□□□ -1.66
Trim3Q9R1R2 AC154562.1-201ENSMUST00000226140 966 ntBASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Gm4963-201ENSMUST00000072718 378 ntBASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Mir20a-201ENSMUST00000083508 107 ntBASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trim3Q9R1R2 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Trim3Q9R1R2 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trim3Q9R1R2 AC159326.1-201ENSMUST00000219989 1302 ntBASIC4.71□□□□□ -1.66
Trim3Q9R1R2 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Gm37767-201ENSMUST00000193239 1834 ntBASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Gm29293-201ENSMUST00000189416 2188 ntBASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Gm14560-201ENSMUST00000118672 375 ntBASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Gm12820-201ENSMUST00000119233 342 ntBASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Gm11584-201ENSMUST00000120636 325 ntBASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Gm15388-201ENSMUST00000121578 726 ntBASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Gm23837-201ENSMUST00000122656 286 ntBASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC4.7□□□□□ -1.66
Trim3Q9R1R2 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC4.7□□□□□ -1.66
Trim3Q9R1R2 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Gm6673-201ENSMUST00000166114 700 ntBASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Mir3058-201ENSMUST00000175126 91 ntBASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Gm4617-201ENSMUST00000178993 331 ntBASIC4.7□□□□□ -1.66
Trim3Q9R1R2 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Gm37996-201ENSMUST00000191859 367 ntBASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Gm18529-201ENSMUST00000193025 1257 ntBASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Gm10048-201ENSMUST00000194196 372 ntBASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Gm42694-201ENSMUST00000196951 358 ntBASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Gm7588-201ENSMUST00000216866 571 ntBASIC4.7□□□□□ -1.66
Trim3Q9R1R2 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Gm25260-201ENSMUST00000083053 134 ntBASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Gm36963-201ENSMUST00000193506 2324 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms